Removing letters after a certain character within a range of columns
Hi there,
I am trying to remove al letters after : character on specific columns from 10th column till 827. I used sed and cut to do so but I am sure there is better one liner someone can think of from unix community members.
Huge file but it has this structure (Total number of Columns = 827, rows = 605278)
Code:
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT Control1 Control2 Case1 Case2
chr1 65872 . T G 2480.51 . AC=65;AN=92;SF=0,1;VRT=1 GT:GQ:DP:AD:PL 1/1:3:243:176,66:27,3,0 0/1:21:148:135,13:21,0,21 0/1:9:250:201,49:9,0,115 .
chr1 65893 . G A 433.77 . AC=7;AN=10;SF=0,1;VRT=1 . . 0/1:173:144,29:198,0,91:91 0/1:143:100,43:180,0,233:99
I am trying to get this structure
Code:
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT Control1 Control2 Case1 Case2
chr1 65872 . T G 2480.51 . AC=65;AN=92;SF=0,1;VRT=1 GT:GQ:DP:AD:PL 1/1 0/1 0/1 .
chr1 65893 . G A 433.77 . AC=7;AN=10;SF=0,1;VRT=1 . . 0/1 0/1
Hi all,
I have a variable, on some machines it is '1024', which is fine, but on others it is '1024Mb' etc. I need this variable to simply be '1024', does anyone know how I could ensure this is always the case? Perhaps a command to remove any letters/characters that aren't integers if there is... (3 Replies)
I need help removing the last character of every line if it is a certain character. For example I need to get rid of a % character if it is in the last position.
Input:
aaa%
%bbb
ccc
d%dd%
Output should be:
aaa
%bbb
ccc
d%dd
I tried this but it gets rid of all of the % characters.... (5 Replies)
Hi all,
I am having a bit of a hard time using awk. I must do something wrong, but I don't know what... Any help would be greatly appreciated!
I read a file, as follows :...
ATOM 21 C THR A 4 23.721 -26.194 1.909 1.00 32.07 C
ATOM 22 O THR A 4 ... (2 Replies)
i have this problem:
i must hide a string with a character such as _ by command
WORD=string;
XXX=`echo $WORD | sed 's//_/g'
but after, users must send in input a character and i must to replace the _ with the input character or better i can do this
-$CHARS_INPUT
i have think to use command... (3 Replies)
I have a text file that has three columns. But at the end of the text file, there are trailing lines that have missing second and third columns:
4 0.04972604 KLHL28
4 0.0497332 CSTB
4 0.04979822 AIF1
4 0.04983331 DECR2
4 0.04990344 KATNB1
4
4
4
4
How can I remove the trailing... (3 Replies)
hi, I have quite a bunch of files with annoyingly long filenames. I wanted to cut the range of characters from 9-18 and just retain the first 8 characters and the .extension. any suggestion how to do it. thanks much.
original filename: 20000105_20000105_20100503.nc.asc
output filename:... (4 Replies)
Hi,
I columns with both number and letters however i need the number 4 trimmed off the lines that have 3 numbers in them so it just because the 2 preceding numbers only
For example
V25QG2-K18QG-V25CG2
L26HG-L17HA-L26CG
I434QD1-L19HB2-I434CD1
I434QD1-A31QB-I434CD1 ... (7 Replies)
Hi all,
Disclosure: I am very new to Unix, but eager to learn..
I've been tasked with transferring logs to a remote server. After I've verified these logs have transferred correctly I have to remove the source files. The naming scheme is:
/directory/2012.05.01
/directory/2012.05.02
..and... (1 Reply)
Hi,
I want to remove trace files in a particular directory for a specific date range. Currently i can remove based on time (e.g find /path/*.trm -mtime +1000 -exec rm {} \;). But i want to remove .trm files within a date range. E.g to remove .trm files between jan 1 2002 to April 15 2005.
... (3 Replies)
In each line of file, I wish to check if word1 is a non-connected subset of any of the other words in the line. If yes, keep only the words that ward1 is a subset of. Else, remove the whole line.
Also, I want to remove the letters that word1 doesn't match with, except for "_+"
Example file:... (2 Replies)
Discussion started by: Viernes
2 Replies
LEARN ABOUT CENTOS
locale::script
Locale::Script(3) User Contributed Perl Documentation Locale::Script(3)NAME
Locale::Script - standard codes for script identification
SYNOPSIS
use Locale::Script;
$script = code2script('phnx'); # 'Phoenician'
$code = script2code('Phoenician'); # 'Phnx'
$code = script2code('Phoenician',
LOCALE_CODE_NUMERIC); # 115
@codes = all_script_codes();
@scripts = all_script_names();
DESCRIPTION
The "Locale::Script" module provides access to standards codes used for identifying scripts, such as those defined in ISO 15924.
Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 15924
four-letter codes will be used.
SUPPORTED CODE SETS
There are several different code sets you can use for identifying scripts. A code set may be specified using either a name, or a constant
that is automatically exported by this module.
For example, the two are equivalent:
$script = code2script('phnx','alpha');
$script = code2script('phnx',LOCALE_SCRIPT_ALPHA);
The codesets currently supported are:
alpha, LOCALE_SCRIPT_ALPHA
This is a set of four-letter (capitalized) codes from ISO 15924 such as 'Phnx' for Phoenician. It also includes additions to this set
included in the IANA language registry.
The Zxxx, Zyyy, and Zzzz codes are not used.
This is the default code set.
num, LOCALE_SCRIPT_NUMERIC
This is a set of three-digit numeric codes from ISO 15924 such as 115 for Phoenician.
ROUTINES
code2script ( CODE [,CODESET] )
script2code ( NAME [,CODESET] )
script_code2code ( CODE ,CODESET ,CODESET2 )
all_script_codes ( [CODESET] )
all_script_names ( [CODESET] )
Locale::Script::rename_script ( CODE ,NEW_NAME [,CODESET] )
Locale::Script::add_script ( CODE ,NAME [,CODESET] )
Locale::Script::delete_script ( CODE [,CODESET] )
Locale::Script::add_script_alias ( NAME ,NEW_NAME )
Locale::Script::delete_script_alias ( NAME )
Locale::Script::rename_script_code ( CODE ,NEW_CODE [,CODESET] )
Locale::Script::add_script_code_alias ( CODE ,NEW_CODE [,CODESET] )
Locale::Script::delete_script_code_alias ( CODE [,CODESET] )
These routines are all documented in the Locale::Codes::API man page.
SEE ALSO
Locale::Codes
The Locale-Codes distribution.
Locale::Codes::API
The list of functions supported by this module.
http://www.unicode.org/iso15924/
Home page for ISO 15924.
http://www.iana.org/assignments/language-subtag-registry
The IANA language subtag registry.
AUTHOR
See Locale::Codes for full author history.
Currently maintained by Sullivan Beck (sbeck@cpan.org).
COPYRIGHT
Copyright (c) 1997-2001 Canon Research Centre Europe (CRE).
Copyright (c) 2001-2010 Neil Bowers
Copyright (c) 2010-2013 Sullivan Beck
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.16.3 2013-06-03 Locale::Script(3)
01-03-2017
Removing letters after a certain character within a range of columns
