Sponsored Content
Top Forums Shell Programming and Scripting Add unique identifier from file to filetype in directory Post 302986492 by Don Cragun on Friday 25th of November 2016 07:00:50 PM
Old 11-25-2016
Are you trying to rename *.bam and *.vcf files? Or, only *.bam files? There is nothing in your current script that does anything with *.vcf files, is there?

Do you only want to rename the files in the directory /home/cmccabe/Desktop/index/R_2016_09_21_14_01_15_user_S5-00580-9-Medexome? Or do you want to rename the files in all of the directories in /home/cmccabe/Desktop/index/ that are named in your input file?

Do you need to look at the directory name to determine which name change needs to occur, or will the "unique identifiers" found in your input file be unique across all directories?
This User Gave Thanks to Don Cragun For This Post:
 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

Directory Inode Number Not Unique

Hi, I know that inode for each file is unique, but is it the for the directory? So far I found different directories has the same inode nubmer when you do ls -i, could some one explain why? Thanks a lot. (9 Replies)
Discussion started by: nj302
9 Replies

2. UNIX for Dummies Questions & Answers

Shell Script Unique Identifier Question

i All I have scripting question. I have a file "out.txt" which is generated by another script the file contains the following my_identifier8859574 logout The number is generated in the script and I have put the my_identifier bit in front of it as a unique identifier I now have... (7 Replies)
Discussion started by: grahambo2005
7 Replies

3. Shell Programming and Scripting

Unique Directory and Folder Deletion Script

Ok, so I just got charged with the task of deleting some 300 user folders in a FTP server to free up some space. I managed to grep and cut the list of user folders to delete into a list of one user folder per line. Example: bob00 jane01 sue03 In the home folder, there are folders a-z, and... (5 Replies)
Discussion started by: b4sher
5 Replies

4. Shell Programming and Scripting

get part of file with unique & non-unique string

I have an archive file that holds a batch of statements. I would like to be able to extract a certain statement based on the unique customer # (ie. 123456). The end for each statement is noted by "ENDSTM". I can find the line number for the beginning of the statement section with sed. ... (5 Replies)
Discussion started by: andrewsc
5 Replies

5. Shell Programming and Scripting

Unique files in a given directory

I keep all my files on a NAS device and copy files from it to usb or local storage when needed. The bad part about this is that I often have the same file on numerous places. I'd like to write a script to check if the files in a given directory exist in another. An example: say I have a... (7 Replies)
Discussion started by: cue
7 Replies

6. Shell Programming and Scripting

Change unique file names into new unique filenames

I have 84 files with the following names splitseqs.1, spliseqs.2 etc. and I want to change the .number to a unique filename. E.g. change splitseqs.1 into splitseqs.7114_1#24 and change spliseqs.2 into splitseqs.7067_2#4 So all the current file names are unique, so are the new file names.... (1 Reply)
Discussion started by: avonm
1 Replies

7. Shell Programming and Scripting

HPUX find string in directory and filetype and replace string

Hi, Here's my dilemma. I need to replace the string Sept_2012 to Oct_2012 in all *config.py files within the current directory and below directories Is this possible? Also I am trying to find all instances of the string Sept_2012 within files in the current directory and below I have... (13 Replies)
Discussion started by: pure_jax
13 Replies

8. Shell Programming and Scripting

Change everything in a file that maps to {module::name.filetype} to _modules/name/applicat

path = content.txt filename = application directory = _modules define create $(eval from := $(shell echo $$1)) \ $(eval to := $(shell echo $$2)) \ sed -i '' 's/$(from)/$(to)/g' content.txt endef all: clear $(eval modules := $(shell egrep -o "{module+\}" $(path))) ... (1 Reply)
Discussion started by: bmson
1 Replies

9. UNIX for Advanced & Expert Users

File command return wrong filetype while file holds group separator char.

hi, I am trying to get the FileType using the File command. I have one file, which holds Group separator along with ASCII character. It's a Text file. But when I ran the File command the FileType is coming as "data". It should be "ASCII, Text file". Is the latest version of File... (6 Replies)
Discussion started by: Arpitak29
6 Replies

10. Shell Programming and Scripting

Bash to create new directory by date followed by identifier and additional subdirectories

I have a bash that downloads a list and if that list has data in it then a new main directory is created (with the date) with several subdirectories (example1, example2, example3). My question is in that list there are portion of specific file types (.vcf.gz) - identifier towards the end that have... (0 Replies)
Discussion started by: cmccabe
0 Replies
sticky(5)						Standards, Environments, and Macros						 sticky(5)

NAME
sticky - mark files for special treatment DESCRIPTION
The sticky bit (file mode bit 01000, see chmod(2)) is used to indicate special treatment of certain files and directories. A directory for which the sticky bit is set restricts deletion of files it contains. A file in a sticky directory can only be removed or renamed by a user who has write permission on the directory, and either owns the file, owns the directory, has write permission on the file, or is a privi- leged user. Setting the sticky bit is useful for directories such as /tmp, which must be publicly writable but should deny users permission to arbitrarily delete or rename the files of others. If the sticky bit is set on a regular file and no execute bits are set, the system's page cache will not be used to hold the file's data. This bit is normally set on swap files of diskless clients so that accesses to these files do not flush more valuable data from the sys- tem's cache. Moreover, by default such files are treated as swap files, whose inode modification times may not necessarily be correctly recorded on permanent storage. Any user may create a sticky directory. See chmod for details about modifying file modes. SEE ALSO
chmod(1), chmod(2), chown(2), mkdir(2), rename(2), unlink(2) BUGS
The mkdir(2) function will not create a directory with the sticky bit set. SunOS 5.10 1 Aug 2002 sticky(5)
All times are GMT -4. The time now is 07:53 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy