sed replace file contents by reading from another file
Hello,
My input file1 is like this by tab-delimited
My input file2 is like this
Now I want to replace the contents of inputfile1 (after gene_id and transcript_id) with the second column value in inputfile2. I did try by separating out the columns and joining based on the columns but since join needs to sort and I DO NOT want this order of input file to be sorted, it is becoming hard for me to get output. Any ideas are highly appreciated.
Please note that the input file row order should not be changed.
Hi,
I need to write a shell script (ksh) to read contents starting at a specific location from one file and append the contents at specific location in another file. Please find below the contents of the source file that I need to read the contents from,
File 1
-----# more... (5 Replies)
I have a file which has following contents:
localhost_IP_SIP_1233026552455.xml
localhost_IP_SIP_1233026552460.xml
localhost_IP_SIP_1233026552467.xml
localhost_IP_SIP_1233026552759.xml
localhost_IP_SIP_1233026552969.xml
localhost_IP_SIP_1233026552975.xml ... (2 Replies)
Hi All,
Need help on this
I have 2 files
one file file1 which has several entries as :
define service{
hostgroup_name !host1,!host5,!host6,.*
service_description check_nrpe
}
define service{
hostgroup_name !host2,!host4,!host6,.*
service_description check_opt
}
another... (2 Replies)
Hi,
I am facing issue while reading data from a file in UNIX. my requirement is to compare two files and for the text pattern matching in the 1st file, replace the contents in second file by the contents of first file from start to the end and write the contents to thrid file.
i am able to... (2 Replies)
Hi Guys,
I need to read a file until I find a blank line. and in the next iteration I want to continue reading from the line I find a keyword.
For ex: my file looks like
PDS_JOB_ALIAS
CRITERIA_ITEM_TYPE
PDS_JOB_CRITERIA_ITEM
CRITERIA_ITEM_TYPE
First I want to read the file... (2 Replies)
Hi Friends,
This is the only solution to my task. So, any help is highly appreciated.
I have a file
cat input1.bed
chr1 100 200 abc
chr1 120 300 def
chr1 145 226 ghi
chr2 567 600 unix
Now, I have another file by name
input2.bed (This file is a binary file not readable by the... (7 Replies)
Hi,
I am doing something basic, but I am missing something. Im trying to read the contents of a file and taking those values and connecting to a database. However, it only connect to one (or reads in) value and then exists.
Here is what it looks like:
listname.txt
db1
db2
db3
Script:... (15 Replies)
Hi, I am trying to use an awk command to replace specific character positions on a line beginning with 80 with contents of another file.
The line beginning with 80 in file1 is as follows:
I want to replace the 000000000178800 (positions 34 - 49) on this file with the contents of... (2 Replies)
Hello,
I have two files: file1 and file2
file1 has the following info:
---
host: "localhost"
port: 3000
reporter_type: "zookeeper"
zk_hosts:
- "localhost:2181"
file2 contains an IP address (1.1.1.1)
What I want to do is replace localhost with 1.1.1.1, so that the... (4 Replies)
So I'm stumped.
First... APOLOGIES... my work is offline in an office that has zero internet connectivity, as required by our client. If need be, I could print out my script attempts and retype them here. But on the off chance... here goes.
I have a text file (file_source) of terms, each line... (3 Replies)