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Top Forums Shell Programming and Scripting awk to compare each file in two directores by storing in variable Post 302982650 by RudiC on Saturday 1st of October 2016 08:23:43 AM
Old 10-01-2016
How about
Code:
for FN in $REF; do awk '...' $FN ${FN%%_*}*.vcf ; done

You may need to add the path to the .vcf files, though.

I have to second RavinderSingh13 in that all your specifications/requests need to be WAY clearer and more detailed/data driven!
This User Gave Thanks to RudiC For This Post:
 

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English(3pm)						 Perl Programmers Reference Guide					      English(3pm)

NAME
English - use nice English (or awk) names for ugly punctuation variables SYNOPSIS
use English; use English qw( -no_match_vars ) ; # Avoids regex performance penalty # in perl 5.16 and earlier ... if ($ERRNO =~ /denied/) { ... } DESCRIPTION
This module provides aliases for the built-in variables whose names no one seems to like to read. Variables with side-effects which get triggered just by accessing them (like $0) will still be affected. For those variables that have an awk version, both long and short English alternatives are provided. For example, the $/ variable can be referred to either $RS or $INPUT_RECORD_SEPARATOR if you are using the English module. See perlvar for a complete list of these. PERFORMANCE
NOTE: This was fixed in perl 5.20. Mentioning these three variables no longer makes a speed difference. This section still applies if your code is to run on perl 5.18 or earlier. This module can provoke sizeable inefficiencies for regular expressions, due to unfortunate implementation details. If performance matters in your application and you don't need $PREMATCH, $MATCH, or $POSTMATCH, try doing use English qw( -no_match_vars ) ; . It is especially important to do this in modules to avoid penalizing all applications which use them. perl v5.18.2 2014-01-06 English(3pm)
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