Perl to extract information from a file line by line
In the below perl code I am using tags within each line to extract certain information. The tags that are used are: STB >0.8 is STRAND BIAS otherwise GOOD FDP is the second number GO towards the end of the line is read into an array and the value returned is outputed, in the first line that value is 2/2 or hom column6 is then dived by 33 to give the last number (in line one it is 455.945/33 or 13
The current output is perfect for most cases however, not all of them. In the line1 that did not work STB has two values in it seperated by a ,. That is not the case in most lines but I can not seem to get the desired output. Thank you .
input
current output
desired output
perl
Last edited by cmccabe; 09-06-2016 at 12:12 PM..
Reason: fixed format
I have a shell script and want to assign a value to a variable. The value is the line exctrated from a file using the line number. The line number it is not fix, and could change any time.
I have tried sed, awk, head .. See my script
# Get randome line number from the file
#selectedline = `awk... (1 Reply)
Hello,
I am having trouble extracting a specific line from a file when the line number is known. My first attempt involved grep -n 'hi' (the word 'hi will always be there) to get the line number before the line that I actually want (line 4).
Extra Notes:
-I am working in a bash script.
-The... (7 Replies)
Hi Guys,
In the following line:
cn=portal.090710.191533.428571000,cn=groups,dc=mp,dc=rj,dc=gov,dc=br
I need to extract this string: portal.090710.191533.428571000
As you can see this string always will be bettween "cn=" and "," strings.
Someone know one regular expression to... (4 Replies)
hi dudes,
I have a text file in the below format
1 s sanity /u02
2 r script1 /u02
3 s sanity /u02
Please tell me a script to read this file line by line, I wrote the below script , but it is printing only 1st line not printing rest... (7 Replies)
FOLKS ,
i have a text file that is generated automatically of an another korn shell script, i want to bring in the fifth line of the text file in to my korn shell script and look for a particular word in the line . Can you all share some thoughts on this one.
thanks...
Venu (3 Replies)
Hello Gurus
I have a source file which has the first line as header and the rest are the records
I need to extract the first column from the second line to extract a value
I/P
... (7 Replies)
Unix box server version
***********
>uname -r
B.11.00
>echo $SHELL
/usr/bin/ksh
--> in this server, I have the path like /IMbuild/dev/im0serv1
---> in that directory I have the folders startup(.jsp files nearly 100 jsp's ) and scripts(contains .js files nearly 100 files) ... (9 Replies)
I have a LOG file which looks like this
Import started at: Mon Jul 23 02:13:01 EDT 2012
Initialization completed in 2.146 seconds.
--------------------------------------------------------------------------------
--
Import summary for Import item: PolicyInformation... (8 Replies)
I am looking for help in processing of those options: '-n' or '-p'
I understand what they do and how to use them.
But, I would like to use them with more than one file (and without any shell-loop; loading the 'perl' once.)
I did try it and -n works on 2 files.
Question is:
- is it possible to... (6 Replies)