Using awk to output matches between two files to one file and mismatches to two others
I am trying to output the matches between $1 of file1 to $3 of file2 into a new file match.
I am also wanting to output the mismatches between those same 2 files and fields to two separate new files called missing from file1 and missing from file2. The input files are tab-delimited, but the output can be space delimited. The awk below hopefully is a good start. Thank you .
When we give an input sequence , the program should match with the pattern and give the matches and mismatches in the output.
i will give you 2 small examples. if you cant get it pls let me know.
i will try to give a clear idea.
example 1:
$a=APPLE; # let it be a pattern... (0 Replies)
Hi,
I am trying to do the following using AWK program.
1. Read the input data file
2. Parse the record and see if it contains errors
3. If the record contains errors, then write it into Reject file, else, write into usual output file or display it on the screen
Here is what I have done -... (6 Replies)
I've two files with data like below:
file1.txt:
AAA,Apples,123
BBB,Bananas,124
CCC,Carrot,125
file2.txt:
Store1|AAA|123|11
Store2|BBB|124|23
Store3|CCC|125|57
Store4|DDD|126|38
So,the field separator in file1.txt is a comma and in file2.txt,it is |
Now,the output should be... (2 Replies)
Hi All. Thanks for your help in advance.
I have a requirement to examine the number of delimiters in each record of a file. If the record has the expected number of delimiters it should be passed into a 'good' file. If it does not, the record should be passed into a 'bad' file. I have been able... (8 Replies)
Hi all,
I have two files, chap.txt and complex.txt.
chap.txt looks like this:
a
d
l
m
r
k
complex.txt looks like this:
a c d e l m n j
a d l p q r
c p r m
......... (7 Replies)
This is probably rehash but I did look. :rolleyes:
I want a bash script that will take Item 1 in File1, traverse all lines in File2 and output if a match exists. Continuing the pattern recursively, Item2, File1, traverse all lines in File2 for a match, continue this pattern until all lines... (6 Replies)
I am trying to apply an awk action over multiple files in a directory. It is a simple action, I want to print out the 1st 2 columns (i.e. $1 and $2) in each tab-separated document and output the result in a new file *.pp
This is the awk that I have come up with so far, which is not giving me a... (6 Replies)
Using the attached file, the below awk command results in the output below:
I can not seem to produce the desired results and need some expert help. Thank you :).
awk -F'' '
{
id += $4
value += $5
occur++
}
END{
printf "%-8s%8s%8s%8s\n", "Gene", "Targets", "Average Depth", "Average... (3 Replies)
In the tab-delimited files, I am trying to match
$1,$2,$3,$4,$5 in fiel1 with $1,$2,$3,$4,$5 in fiel2 and create and output file that lists what matches and what was not found (or doesn't match).
However the awk below seems to skip the first line and does not produce the desired output. I think... (2 Replies)
Hello Guys,
I am pretty new to unix shell scripting where in i need to compare two files which are comma separated files.
So here i go with the file contents
cty_id,grade_val,g_val_2,g_val_3
001,10,20,30
002,,,40
003,100,,10
grade_val,g_val_2,cty_id
10,20,001
41,,002
100,1,003... (4 Replies)
08-26-2016
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