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Top Forums Shell Programming and Scripting Help with compare 2 column content and corrected/replaced word Post 302978312 by perl_beginner on Friday 29th of July 2016 02:26:59 AM
Old 07-29-2016
Hi R. Singh, thanks again for your prompt reply and help Smilie

I try your awk command with other record, it seems no work.
I believe is due to
Code:
split("ATC:C:TCGCG:G", array,":")

which is different from other record.

Is there any way can let the awk automatic replace all the N in first column based on the corresponding position at second column word?

I was thinking to use the split command to split all the word in first column and second column.
Then use
Code:
awk if else

to print out the word based on second column when the first column got "N".

Thanks a lot and again for your advice.
 

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COLRM(1)						    BSD General Commands Manual 						  COLRM(1)

NAME
colrm -- remove columns from a file SYNOPSIS
colrm [start [stop]] DESCRIPTION
The colrm utility removes selected columns from the lines of a file. A column is defined as a single character in a line. Input is read from the standard input. Output is written to the standard output. If only the start column is specified, columns numbered less than the start column will be written. If both start and stop columns are spec- ified, columns numbered less than the start column or greater than the stop column will be written. Column numbering starts with one, not zero. Tab characters increment the column count to the next multiple of eight. Backspace characters decrement the column count by one. ENVIRONMENT
The LANG, LC_ALL and LC_CTYPE environment variables affect the execution of colrm as described in environ(7). EXIT STATUS
The colrm utility exits 0 on success, and >0 if an error occurs. SEE ALSO
awk(1), column(1), cut(1), paste(1) HISTORY
The colrm command appeared in 3.0BSD. BSD
August 4, 2004 BSD
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