How many studies have unequal values for each pair?
I have several Studies (s) which has points (p) having Values (v).
My goal is to determine for each pair of points, how many studies have different values ( if available ).
For example, the pair (p1,p5) are involved in 2 studies , STUDY 1 (value1,value3 ) and STUDY 3 (value1, value5 ) where both values are different. So the count for this pair is 2. Pair (p1,p3) is present in both studies 1 and 3 with same values. So the count is 0.
So my desired output is
I do have a working solution for this which works for a small data-set for runs forever for the actual dataset which has several thousand factors in each column
How do I split a file into many parts but with different amounts of lines per part? I looked at the split command but that only splits evenly.
I'd like a range specified to determine how many lines each output file should have.
For example, if the input file has 1000 lines and the range is... (1 Reply)
Hi,
I have two files that I would like to merge and think that there should be a solution using awk. The files look something like this:
file 1
IDX1 IDY1
IDX2 IDY2
IDX3 IDY3
file 2
IDY1 dataA data1
IDY2 dataB data2
IDY3 dataC data3
Desired output
IDX1 IDY1 dataA data1
IDX2 ... (5 Replies)
Hi,
I have 25 groups and I need to perform all possible pairwise compariosns between them using the formula n(n-1)/2. SO in my case it will be 25(25-1)/2 which is equal to 300 comparisons.
my 25 groups are
FG1 FG2 FG3 FG4 FG5
NT5E CD44 CD44 CD44 AXL
ADAM19 CCDC80 L1CAM L1CAM CD44... (1 Reply)
I have two files for comparison which are extracts from set of xml files.
file1 has:
Comparing File: BRCSH1to320140224CC3.xml
:: TZZZ:BR
:: TAZZ:OUT
UIZZ:0 :: ERAZ:1.000000
UIZZ:0 :: CTZZ:B
UIZZ:0 :: CCAZ:MYR
Comparing File: BRMY20140224CC18REG013SPFNSY13.xml
:: TZZZ:BR
:: TAZZ:INB... (1 Reply)
Team,
I have a file like below
FILE:
NAM1,KEY1,VAL1
NAM1,KEY2,VAL2
NAM1,KEY3,VAL3
NAM2,KEY1,VALA
NAM2,KEY2,VALB
NAM2,KEY3,VALCOutput:
I have to build commands like below
<Script> VAL1 VAL2 VAL3 NAME1
<Script> VALA VALB VALC NAME2Can you please help with awk command i can use... (4 Replies)
Discussion started by: mallak
4 Replies
LEARN ABOUT MOJAVE
dumpvalue
Dumpvalue(3pm) Perl Programmers Reference Guide Dumpvalue(3pm)NAME
Dumpvalue - provides screen dump of Perl data.
SYNOPSIS
use Dumpvalue;
my $dumper = Dumpvalue->new;
$dumper->set(globPrint => 1);
$dumper->dumpValue(*::);
$dumper->dumpvars('main');
my $dump = $dumper->stringify($some_value);
DESCRIPTION
Creation
A new dumper is created by a call
$d = Dumpvalue->new(option1 => value1, option2 => value2)
Recognized options:
"arrayDepth", "hashDepth"
Print only first N elements of arrays and hashes. If false, prints all the elements.
"compactDump", "veryCompact"
Change style of array and hash dump. If true, short array may be printed on one line.
"globPrint"
Whether to print contents of globs.
"dumpDBFiles"
Dump arrays holding contents of debugged files.
"dumpPackages"
Dump symbol tables of packages.
"dumpReused"
Dump contents of "reused" addresses.
"tick", "quoteHighBit", "printUndef"
Change style of string dump. Default value of "tick" is "auto", one can enable either double-quotish dump, or single-quotish by
setting it to """ or "'". By default, characters with high bit set are printed as is. If "quoteHighBit" is set, they will be quoted.
"usageOnly"
rudimentary per-package memory usage dump. If set, "dumpvars" calculates total size of strings in variables in the package.
unctrl
Changes the style of printout of strings. Possible values are "unctrl" and "quote".
subdump
Whether to try to find the subroutine name given the reference.
bareStringify
Whether to write the non-overloaded form of the stringify-overloaded objects.
quoteHighBit
Whether to print chars with high bit set in binary or "as is".
stopDbSignal
Whether to abort printing if debugger signal flag is raised.
Later in the life of the object the methods may be queries with get() method and set() method (which accept multiple arguments).
Methods
dumpValue
$dumper->dumpValue($value);
$dumper->dumpValue([$value1, $value2]);
Prints a dump to the currently selected filehandle.
dumpValues
$dumper->dumpValues($value1, $value2);
Same as "$dumper->dumpValue([$value1, $value2]);".
stringify
my $dump = $dumper->stringify($value [,$noticks] );
Returns the dump of a single scalar without printing. If the second argument is true, the return value does not contain enclosing
ticks. Does not handle data structures.
dumpvars
$dumper->dumpvars('my_package');
$dumper->dumpvars('my_package', 'foo', '~bar$', '!......');
The optional arguments are considered as literal strings unless they start with "~" or "!", in which case they are interpreted as
regular expressions (possibly negated).
The second example prints entries with names "foo", and also entries with names which ends on "bar", or are shorter than 5 chars.
set_quote
$d->set_quote('"');
Sets "tick" and "unctrl" options to suitable values for printout with the given quote char. Possible values are "auto", "'" and """.
set_unctrl
$d->set_unctrl('unctrl');
Sets "unctrl" option with checking for an invalid argument. Possible values are "unctrl" and "quote".
compactDump
$d->compactDump(1);
Sets "compactDump" option. If the value is 1, sets to a reasonable big number.
veryCompact
$d->veryCompact(1);
Sets "compactDump" and "veryCompact" options simultaneously.
set
$d->set(option1 => value1, option2 => value2);
get
@values = $d->get('option1', 'option2');
perl v5.18.2 2013-11-04 Dumpvalue(3pm)