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Top Forums Shell Programming and Scripting Use same file selected in first bash process that has matching digits in it fot the second Post 302977923 by pilnet101 on Saturday 23rd of July 2016 02:15:59 PM
Old 07-23-2016
Hi - This is only rough but something like the below should work on your data:

Code:
#!/bin/bash
FILESDIR=/home/cmccabe/Desktop/files
ANNOVARDIR=/home/cmccabe/Desktop/annovar

PS3="please select a file to analyze with a panel: "
select file in ${FILESDIR}/*; do
        [[ -z ${file} ]] && printf "Pick a file" || break
done

filename=${file##*/}
file2=$(ls ${ANNOVARDIR}/${filename%%_*}*)
printf "File 1 is: ${file}\n"
printf "File 2 is: ${file2}\n"

This makes the assumption that:
  • There is only 1 file in the 'annovar' directory which has the same prefix (delimited by an underscore) as the associated file in the 'files' directory and it exists
  • This is not just applicable for '123_' but for all files
This User Gave Thanks to pilnet101 For This Post:
 

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IRSEND(1)								FSF								 IRSEND(1)

NAME
irsend - basic LIRC program to send infra-red commands SYNOPSIS
irsend [options] DIRECTIVE REMOTE CODE [CODE...] DESCRIPTION
Asks the lircd daemon to send one or more CIR (Consumer Infra-Red) commands. This is intended for remote control of electronic devices such as TV boxes, HiFi sets, etc. DIRECTIVE can be: SEND_ONCE - send CODE [CODE ...] once SEND_START - start repeating CODE SEND_STOP - stop repeating CODE LIST - list configured remote items SET_TRANSMITTERS - set transmitters NUM [NUM ...] SIMULATE - simulate IR event REMOTE is the name of a remote, as described in the lircd configuration file. CODE is the name of a remote control key of REMOTE, as it appears in the lircd configuration file. NUM is the transmitter number of the hardware device. For the LIST DIRECTIVE, REMOTE and/or CODE can be empty: LIST "" "" - list all configured remote names LIST REMOTE "" - list all codes of REMOTE LIST REMOTE CODE - list only CODE of REMOTE The SIMULATE command only works if it has been explicitly enabled in lircd. -h --help display usage summary -v --version display version -d --device use given lircd socket [/var/run/lirc/lircd] -a --address=host[:port] connect to lircd at this address -# --count=n send command n times EXAMPLES
irsend LIST DenonTuner "" irsend SEND_ONCE DenonTuner PROG-SCAN irsend SEND_ONCE OnkyoAmpli VOL-UP VOL-UP VOL-UP VOL-UP irsend SEND_START OnkyoAmpli VOL-DOWN ; sleep 3 irsend SEND_STOP OnkyoAmpli VOL-DOWN irsend SET_TRANSMITTERS 1 irsend SET_TRANSMITTERS 1 3 4 irsend SIMULATE "0000000000000476 00 OK TECHNISAT_ST3004S" FILES
/etc/lirc/lircd.conf Default lircd configuration file. It should contain all the remotes, their infra-red codes and the corresponding timing and wave- form details. DIAGNOSTICS
If lircd is not running (or /var/run/lirc/lircd lacks write permissions) irsend aborts with the following diagnostics: "irsend: could not connect to socket" "irsend: Connection refused" (or "Permission denied"). SEE ALSO
The documentation for lirc is maintained as html pages. They are located under html/ in the documentation directory. lircd(8), mode2(1), smode2(1), xmode2(1), irrecord(1), irw(1), http://www.lirc.org. irsend 0.8.7pre1 May 2010 IRSEND(1)
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