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Top Forums Shell Programming and Scripting awk to combine matches and use a field to adjust coordinates in other fields Post 302977606 by RavinderSingh13 on Wednesday 20th of July 2016 11:47:52 AM
Old 07-20-2016
Hello cmccabe,

Could you please try following and let me know if this helps you.
Code:
awk 'FNR==NR{S[$4]++;next} ($4 in S){if(S[$4]>1){print $1 OFS $2 OFS $2+S[$4] OFS $5;} else {if($6==1){print $1 OFS $2 OFS $2 OFS $5} else {print $1 OFS $2+$6 OFS $2+$6 OFS $5}};delete S[$4]}'   Input_file  Input_file

Output will be as follows.
Code:
chrX 110961329 110961334 ALG13
chr2 50573818 50573822 NRXN1
chrX 135080256 135080256 SLC9A6
chr18 53298529 53298529 TCF4

Thanks,
R. Singh
This User Gave Thanks to RavinderSingh13 For This Post:
 

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IO::Async::Signal(3pm)					User Contributed Perl Documentation				    IO::Async::Signal(3pm)

NAME
"IO::Async::Signal" - event callback on receipt of a POSIX signal SYNOPSIS
use IO::Async::Signal; use IO::Async::Loop; my $loop = IO::Async::Loop->new; my $signal = IO::Async::Signal->new( name => "HUP", on_receipt => sub { print "I caught SIGHUP "; }, ); $loop->add( $signal ); $loop->run; DESCRIPTION
This subclass of IO::Async::Notifier invokes its callback when a particular POSIX signal is received. Multiple objects can be added to a "Loop" that all watch for the same signal. The callback functions will all be invoked, in no particular order. EVENTS
The following events are invoked, either using subclass methods or CODE references in parameters: on_receipt Invoked when the signal is received. PARAMETERS
The following named parameters may be passed to "new" or "configure": name => STRING The name of the signal to watch. This should be a bare name like "TERM". Can only be given at construction time. on_receipt => CODE CODE reference for the "on_receipt" event. Once constructed, the "Signal" will need to be added to the "Loop" before it will work. AUTHOR
Paul Evans <leonerd@leonerd.org.uk> perl v5.14.2 2012-10-24 IO::Async::Signal(3pm)
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