awk to combine matches and use a field to adjust coordinates in other fields
Trying to output a result that uses the data from file to combine and subtract specific lines. If $4 matches in each line then the last $6 value is added to $2 and that becomes the new$3. Each matching line in combined into one with $1 then the original $2 then the new$3 then $5. For the cases where there is only a sing value in $6 that matches a line, then if that value is 1, then the original $2 is the new $3 in the result. If the value in $6 that matches a line, then if that value is anything but 1, then the digit is added to the original $2 and the new $3 in the result. I hope this is possibe. Thanks .
Trying to sum field #6 when field #2 matches string as follows:
Input data:
2010-09-18-20.24.44.206117 UOWEXEC db2bp DB2XYZ hostname 1
2010-09-18-20.24.44.206117 UOWWAIT db2bp DB2XYZ hostname ... (3 Replies)
Hi experts,
I need to print the first field first then last two fields should come next and then i need to print rest of the fields.
Input :
a1,abc,jsd,fhf,fkk,b1,b2
a2,acb,dfg,ghj,b3,c4
a3,djf,wdjg,fkg,dff,ggk,d4,d5
Expected output:
a1,b1,b2,abc,jsd,fhf,fkk... (6 Replies)
Trying to use awk to find a keyword and return the matches in the row, but also $1 and $2, which are the unique id's, but they only appear once. Thank you :).
file
name 31 Index Chromosomal Position Gene Inheritance
122 2106725 TSC2 AD
124 2115481 TSC2 AD
121 2105400 TSC2 AD... (6 Replies)
In the below awk I am trying to combine all matching $4 into a single $5 (up to the -), and count the lines in $6 and average all values in $7. The awk is close but it seems to only be using the last line in the file and skipping all others. The posted input is a sample of the file that is over... (3 Replies)
In the below I am trying to use awk to match all the $13 values in input, which is tab-delimited,
that are in $1 of gene which is just a single column of text.
However only the line with the greatest $9 value in input needs to be printed.
So in the example below all the MECP2 and LTBP1... (0 Replies)
I am trying to output a tab-delimited result that uses the data from a tab-delimited file to combine and subtract specific lines.
If $4 matches in each line then the first matching sequential $6 value is added to $2, unless the value is 1, then the original $2 is used (like in the case of line... (3 Replies)
I am trying to use awk to format the file below, which is tab-delimited. The desired out is space delimited and is in the order of
$9 $13 $2 $10-$11.$10 and $11 are often times multiple values separated by a comma, so the value in $10 is combined with the first value from
$11 using the comma.... (5 Replies)
The below awk executes as is and produces the current output. It isvery close but what Ican not seem to do is add the -exon..., the ... portion comes from $1 and the _exon is static and will never change. If there is + sign in $4 then the ... is in acending order or sequential. If there is a - in... (2 Replies)
I have a text file with many thousands of lines, a small sample of which looks like this:
InputFile:PS002,003 D -1 5 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 6 6 -1 -1 -1 -1 0 509 0
PS002,003 PSQ 0 1 7 18 1 0 -1 1 1 3 -1 -1 ... (5 Replies)
In the file below I am trying to count the given repeats of A,T,C,G in each string of letters. Each sequence is below the > and it is possible for a string of repeats to wrap from the line above. For example, in the first line the last letter is a T and the next lines has 3 more. I think the below... (10 Replies)
07-20-2016
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