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Top Forums Shell Programming and Scripting Add specific string to last field of each line in perl based on value Post 302976486 by cmccabe on Wednesday 29th of June 2016 05:52:50 PM
Old 06-29-2016
My attempt at combining the two threads into one perl code:

Code:
perl -plae 'BEGIN{%h=qw(0/0 hom 0/1 het 1/1 hom 1/2 het 2/2 hom)} /([0-2]\/[0-2])/ and $_ .=join ("\t", "", $h{$1}, int($F[5]/33+0.5)) and $_ .=join ("\t", "", /^[^#].*FDP=(\d+);.*STB=(\d+\.\d+);/ and $_.=($2 >= 0.8?" STRAND BIAS ":" GOOD ")).$1."' input > result
Can't find string terminator '"' anywhere before EOF at -e line 1.

I appreciate all your help and explanations Smilie

Last edited by cmccabe; 06-29-2016 at 06:53 PM.. Reason: added edit
 

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Tk_GetJoinStyle(3)					       Tk Library Procedures						Tk_GetJoinStyle(3)

__________________________________________________________________________________________________________________________________________________

NAME
Tk_GetJoinStyle, Tk_NameOfJoinStyle - translate between strings and join styles SYNOPSIS
#include <tk.h> int Tk_GetJoinStyle(interp, string, joinPtr) const char * Tk_NameOfJoinStyle(join) ARGUMENTS
Tcl_Interp *interp (in) Interpreter to use for error reporting. const char *string (in) String containing name of join style: one of "bevel", "miter", or "round". int *joinPtr (out) Pointer to location in which to store X join style corresponding to string. int join (in) Join style: one of JoinBevel, JoinMiter, JoinRound. _________________________________________________________________ DESCRIPTION
Tk_GetJoinStyle places in *joinPtr the X join style corresponding to string, which will be one of JoinBevel, JoinMiter, or JoinRound. Join styles are typically used in X graphics contexts to indicate how adjacent line segments should be joined together. See the X documentation for information on what each style implies. Under normal circumstances the return value is TCL_OK and interp is unused. If string does not contain a valid join style or an abbrevia- tion of one of these names, then an error message is stored in interp->result, TCL_ERROR is returned, and *joinPtr is unmodified. Tk_NameOfJoinStyle is the logical inverse of Tk_GetJoinStyle. Given a join style such as JoinBevel it returns a statically-allocated string corresponding to join. If join is not a legal join style, then "unknown join style" is returned. KEYWORDS
bevel, join style, miter, round Tk Tk_GetJoinStyle(3)
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