Sponsored Content
Full Discussion: awk merge matching columns
Top Forums Shell Programming and Scripting awk merge matching columns Post 302975850 by andy391791 on Monday 20th of June 2016 05:56:44 AM
Old 06-20-2016
Hi Mo, the desired output you have put does not match what you have specified, as
Code:
Parent=tRNA-Tyr6.r01

has a + in file1 but your desired output shows a -
Also you have put the last field from file2 in the desired output, but this is not in your specification.

Anyway, if its any help the following code

Code:
awk 'NR==FNR{a[$1];next} $10 in a {print $10,$7}' file2 file1

Will give an output of

Code:
"Parent=tRNA-Tyr6.r01"; +
"Parent=mRNA-Tyr2.r01"; +


Last edited by andy391791; 06-20-2016 at 07:15 AM..
This User Gave Thanks to andy391791 For This Post:
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

using command line arguments as columns for pattern matching using awk

Hi, I wish to use a column, as inputted by a user from command line, for pattern matching. awk file: { if($1 ~ /^8/) { print $0> "temp2.csv" } } something like this, but i want '$1' to be any column as selected by the user from command line. ... (1 Reply)
Discussion started by: invinclible0009
1 Replies

2. Shell Programming and Scripting

awk - Matching columns between 2 files and reordering results

I am trying to match 4 colums (first_name,last_name,dob,ssn) between 2 files and when there is an exact match I need to write out these matches to a new file with a combination of fields from file1 and file2. I've managed to come up with a way to match these 2 files based on the columns (see below)... (7 Replies)
Discussion started by: ambroze
7 Replies

3. Shell Programming and Scripting

Find min.max value if matching columns found using AWK

Input_ File : 2 3 4 5 1 1 0 1 2 1 -1 1 2 1 3 1 3 1 4 1 6 5 6 6 6 6 6 7 6 7 6 8 5 8 6 7 Desired output : 2 3 4 5 -1 1 4 1 6 5 6 8 5 8 6 7 (3 Replies)
Discussion started by: vasanth.vadalur
3 Replies

4. Shell Programming and Scripting

Help with awk Matching columns from two files

Hello, I have two files as following: #bin chrom chromStart chromEnd name score strand observed 585 chr2 29442 29443 rs4637157 0 + C/T 585 chr2 33011 33012 rs13423995 0 + A/G 585 chr2 34502 34503 rs13386087 0 + ... (2 Replies)
Discussion started by: Homa
2 Replies

5. Shell Programming and Scripting

Merge two files matching columns

Hi! I need to merge two files when col1 (x:x:x) matching and adds second column from file1.txt. # cat 1.txt aaa;a12 bbb;b13 ccc;c33 ddd;d55 eee;e11 # cat 2.txt bbb;b55;34444;d55 aaa;a15;35666;a44 I try with this awk and I get succesfully first column from 1.txt: # awk -F";"... (2 Replies)
Discussion started by: fhluque
2 Replies

6. Shell Programming and Scripting

awk to copy previous line matching a particular columns

Hello Help, 2356798 7689867 999 000 123678 20385907 9797 666 17978975 87468976 968978 98798 I am trying to have out put which actually look for the third column value of 9797 and then it insert line there after with first, second column value exactly as the previous line and replace the third... (3 Replies)
Discussion started by: Indra2011
3 Replies

7. Shell Programming and Scripting

awk split columns after matching on rows and summing the last column

input: chr1 1 2 3 chr1 1 2 4 chr1 2 4 5 chr2 3 6 9 chr2 3 6 10 Code: awk '{a+=$4}END{for (i in a) print i,a}' input Output: chr112 7 chr236 19 chr124 5 Desired output: chr1 1 2 7 chr2 3 6 19 chr1 2 4 5 (1 Reply)
Discussion started by: jacobs.smith
1 Replies

8. Shell Programming and Scripting

awk - matching on 2 columns for differents lines

Given this file (I separated them in block to make my explanation clearer): 92157768877;Sof_deme_Fort_Email_am_%yyyy%%mm%%dd%;EMAIL;20/02/2015;1;0;0 92157768877;Sof_trav_Fort_Email_am_%yyyy%%mm%%dd%;EMAIL;20/02/2015;1;0;0 91231838895;Sof_deme_faible_Email_am;EMAIL;26/01/2015;1 0;0... (1 Reply)
Discussion started by: Andy_K
1 Replies

9. Shell Programming and Scripting

Merge columns from two files using awk

I have two csv files : say a.csv, b.csv a.csv looks like this : property1,property2,100 property3,property4,200 In a.csv, the combination of column1 and column2 will be unique b.csv looks like this property1,property2, 300, t1 property1,property2, 400,t2 property3, property4,800,t1... (2 Replies)
Discussion started by: Lakshmikumari
2 Replies

10. Shell Programming and Scripting

awk Matching Columns - Am I missing something?

I am using awk to match columns and output based on those matches. For some reason it is not printing matching columns, am I missing something? Operating system - windows with cygwin. Command that I am using: sed 's/]*,]*/,/g' $tempdir/file1 > $tempdir/file1.$$ && awk -F, 'FNR==NR{f2=$2... (7 Replies)
Discussion started by: dis0wned
7 Replies
Locale::Codes::LangExt(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangExt(3pm)

NAME
Locale::Codes::LangExt - standard codes for language extension identification SYNOPSIS
use Locale::Codes::LangExt; $lext = code2langext('acm'); # $lext gets 'Mesopotamian Arabic' $code = langext2code('Mesopotamian Arabic'); # $code gets 'acm' @codes = all_langext_codes(); @names = all_langext_names(); DESCRIPTION
The "Locale::Codes::LangExt" module provides access to standard codes used for identifying language extensions, such as those as defined in the IANA language registry. Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default IANA language registry codes will be used. SUPPORTED CODE SETS
There are several different code sets you can use for identifying language extensions. A code set may be specified using either a name, or a constant that is automatically exported by this module. For example, the two are equivalent: $lext = code2langext('acm','alpha'); $lext = code2langext('acm',LOCALE_LANGEXT_ALPHA); The codesets currently supported are: alpha This is the set of three-letter (lowercase) codes from the IANA language registry, such as 'acm' for Mesopotamian Arabic. This is the default code set. ROUTINES
code2langext ( CODE [,CODESET] ) langext2code ( NAME [,CODESET] ) langext_code2code ( CODE ,CODESET ,CODESET2 ) all_langext_codes ( [CODESET] ) all_langext_names ( [CODESET] ) Locale::Codes::LangExt::rename_langext ( CODE ,NEW_NAME [,CODESET] ) Locale::Codes::LangExt::add_langext ( CODE ,NAME [,CODESET] ) Locale::Codes::LangExt::delete_langext ( CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_alias ( NAME ,NEW_NAME ) Locale::Codes::LangExt::delete_langext_alias ( NAME ) Locale::Codes::LangExt::rename_langext_code ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::add_langext_code_alias ( CODE ,NEW_CODE [,CODESET] ) Locale::Codes::LangExt::delete_langext_code_alias ( CODE [,CODESET] ) These routines are all documented in the Locale::Codes::API man page. SEE ALSO
Locale::Codes The Locale-Codes distribution. Locale::Codes::API The list of functions supported by this module. http://www.iana.org/assignments/language-subtag-registry The IANA language subtag registry. AUTHOR
See Locale::Codes for full author history. Currently maintained by Sullivan Beck (sbeck@cpan.org). COPYRIGHT
Copyright (c) 2011-2012 Sullivan Beck This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.16.2 2012-10-11 Locale::Codes::LangExt(3pm)
All times are GMT -4. The time now is 10:03 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy