The awk is close but hopefully the below explanation helps. Both file1 and file2 are tab-delineated, since $1 and $2 of file1 match $1 and $2 in file2, the last 4 strings in file2 are copied to the end of the matching file1 line. In thiscase the last 4 strings are GOOD 399 reads hom and are in bold in file2. Thank you very much .
Is there any way to remove carriage retuns between the records?
We have input records separated by TABS and have carriage returns as below:
123 456 789 ABC "1952.00" 678 "abcdef
ghik
lmno"
Above we... (10 Replies)
Hi there, I have a csv file with some columns comma sepated like this :
4502-17,PETER,ITA2,LEGUE,92,ME - HALF,23/05/10 15:00
4502-18,CARL,ITA2,LEGUE,96,ME - HALF,20/01/09 14:00
4502-19,OTTO,ITA2,LEGUE,97,ME - MARY,23/05/10 15:00
As you can see the column n. 7 is a timestamp column, I need... (23 Replies)
Hi, all
I need to get fields in a line that are separated by commas, some of the fields are enclosed with double quotes, and they are supposed to be treated as a single field even if there are commas inside the quotes.
sample input:
for this line, 5 fields are supposed to be extracted, they... (8 Replies)
First, thanks for the help in previous posts... couldn't have gotten where I am now without it!
So here is what I have, I use AWK to match $1 and $2 as 1 string in file1 to $1 and $2 as 1 string in file2. Now I'm wondering if I can extend this AWK command to incorporate the following:
If $1... (4 Replies)
I am trying to parse the input in awk to include the |gc= in $4 but am not able to. The below is close:
awk so far:
awk '{sub(/\|]+]++/, ""); print }' input.txt Input
chr1 955543 955763 AGRN-6|pr=2|gc=75 0 +
chr1 957571 957852 AGRN-7|pr=3|gc=61.2 0 +
chr1 970621 ... (7 Replies)
I am trying to remove each line in which $2 is FP or RFP. I believe the below will remove one instance but not both. Thank you :).
file
12
123 FP
11
10 RFP
awk
awk -F'\t' '
$2 != "FP"' file
desired output
12
11 (6 Replies)
I am trying to look for $2 of file1 (skipping the header) in $2 of file2 (skipping the header) and if they match and the value in $10 is > 30 and $11 is > 49, then print the line from file1 to a output file. If no match is foung the line is not printed. Both the input and output are tab-delimited.... (3 Replies)
I cannot seem to get what should be a simple awk one-liner to work correctly and cannot figure out why. I would like to use patterns from a specific field in one file as regex to search for matching strings in the entire line ($0) of another file.
I would like to output the lines of File2 which... (1 Reply)
In the awk I am trying to add :p.=? to the end of each $9 that matches the pattern NM_. The below executes andis close but I can not seem to figure out why the :p.=? repeats in the split as in the green in the current output. I have added comments as well. Thank you :).
file
... (4 Replies)
In the awk below I am trying to match the value in $4 of file1 with the split value from $4 in file2. I store the value of $4 in file1 in A and the split value (using the _ for the split) in array. I then strore the value in $2 as min, the value in $3 as max, and the value in $1 as chr.
If A is... (6 Replies)
Discussion started by: cmccabe
6 Replies
LEARN ABOUT ULTRIX
mv
mv(1) General Commands Manual mv(1)Name
mv - move or rename files
Syntax
mv [-i] [-f] [-] file1 file2
mv [-i] [-f] [-] file... directory
Description
The command moves (changes the name of) file1 to file2.
If file2 already exists, it is removed before file1 is moved. If file2 has a mode which forbids writing, prints the mode and reads the
standard input to obtain a line. If the line begins with y, the move takes place. If it does not, exits. For further information, see
In the second form, one or more files (plain files or directories) are moved to the directory with their original file-names.
The command refuses to move a file onto itself.
Options
- Interprets all following arguments as file names to allow file names starting with a minus.
-f Force. This option overrides any mode restrictions or the -i switch.
-i Interactive mode. If a move is to supersede an existing file, the system prompts youw with the name of the file fol-
lowed by a question mark. If you type a string that begins with y, the move occurs. If you type any other response,
the move does not occur.
Restrictions
If file1 and file2 lie on different file systems, must copy the file and delete the original. In this case the owner name becomes that of
the copying process and any linking relationship with other files is lost.
See Alsocp(1), ln(1)mv(1)