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Full Discussion: How to prepend filename to its content without a third file?
Top Forums Shell Programming and Scripting How to prepend filename to its content without a third file? Post 302972769 by yifangt on Tuesday 10th of May 2016 03:52:32 PM
Old 05-10-2016
How to prepend filename to its content without a third file?
Hello,
Is possibly there a way to prepend the filename to its content without a third file? The reason is to add a header to each file contents to distinguish each other when they are pasted side-by-side.
Code:
sample.txt:

XLOC_001   0
XLOC_002   23
XLOC_003   4
XLOC_012   6

output (with the same name sample.txt):
Code:
sample.txt:

geneID     sample.txt
XLOC_001   0
XLOC_002   23
XLOC_003   4
XLOC_012   6

So far, I've tried:
Code:
for i in *.txt; do (echo "geneID    $i" ; cat $i) > ${i}; done

but got error: input file is output file
I'm aware of the solution is to use a tmp file, and rename it to the original name.
Code:
for i in *.txt; do (echo "geneID    $i" ; cat $i) > ${i}.tmp; mv ${i}.tmp ${i}; done

I am wondering if there is a way to do this job without the "tmp" file. The closest function I can think of is to add filename to its content within vim and :wq which does not require a third file name, but I have hundreds of files to modify.
Thanks!
Last edited by yifangt; 05-10-2016 at 05:28 PM.. Reason: typo
 

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LEARN ABOUT OSX

locale::codes::langfam

Locale::Codes::LangFam(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangFam(3pm)

NAME

       Locale::Codes::LangFam - standard codes for language extension identification

SYNOPSIS

	  use Locale::Codes::LangFam;

	  $lext = code2langfam('apa');		       # $lext gets 'Apache languages'
	  $code = langfam2code('Apache languages');    # $code gets 'apa'

	  @codes   = all_langfam_codes();
	  @names   = all_langfam_names();

DESCRIPTION

       The "Locale::Codes::LangFam" module provides access to standard codes used for identifying language families, such as those as defined in
       ISO 639-5.

       Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639-5
       language family codes will be used.

SUPPORTED CODE SETS

       There are several different code sets you can use for identifying language families. A code set may be specified using either a name, or a
       constant that is automatically exported by this module.

       For example, the two are equivalent:

	  $lext = code2langfam('apa','alpha');
	  $lext = code2langfam('apa',LOCALE_LANGFAM_ALPHA);

       The codesets currently supported are:

       alpha
	   This is the set of three-letter (lowercase) codes from ISO 639-5 such as 'apa' for Apache languages.

	   This is the default code set.

ROUTINES

       code2langfam ( CODE [,CODESET] )
       langfam2code ( NAME [,CODESET] )
       langfam_code2code ( CODE ,CODESET ,CODESET2 )
       all_langfam_codes ( [CODESET] )
       all_langfam_names ( [CODESET] )
       Locale::Codes::LangFam::rename_langfam  ( CODE ,NEW_NAME [,CODESET] )
       Locale::Codes::LangFam::add_langfam  ( CODE ,NAME [,CODESET] )
       Locale::Codes::LangFam::delete_langfam  ( CODE [,CODESET] )
       Locale::Codes::LangFam::add_langfam_alias  ( NAME ,NEW_NAME )
       Locale::Codes::LangFam::delete_langfam_alias  ( NAME )
       Locale::Codes::LangFam::rename_langfam_code  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangFam::add_langfam_code_alias  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangFam::delete_langfam_code_alias  ( CODE [,CODESET] )
	   These routines are all documented in the Locale::Codes::API man page.

SEE ALSO

       Locale::Codes
	   The Locale-Codes distribution.

       Locale::Codes::API
	   The list of functions supported by this module.

       http://www.loc.gov/standards/iso639-5/id.php
	   ISO 639-5 .

AUTHOR

       See Locale::Codes for full author history.

       Currently maintained by Sullivan Beck (sbeck@cpan.org).

COPYRIGHT

	  Copyright (c) 2011-2012 Sullivan Beck

       This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

perl v5.16.2							    2012-10-11					       Locale::Codes::LangFam(3pm)
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