Inserting shell script input data automatically from a text file
Dear experts,
I am new to linux programming. I have a shell script which i should run it on all my samples.
I only define input and out put for this script. The inputs are 3 numbers(coordination numbers) which are available in a series of text file.
Since i have a lots of samples, it takes a lot of time to manually insert the numbers to the script.
Is it possible to write a script which automatically insert the numbers from the text files to the script?
An example of my text filein this example only 49 75 48 are used as inputs, so i need to extract them automatically from the text file and insert them as inputs to the script)
Code:
Cluster Index Voxels MAX MAX X (vox) MAX Y (vox) MAX Z (vox) COG X (vox) COG Y (vox) COG Z (vox)
15 17 5.07 49 75 48 48.1 73.5 47.4
14 16 5.52 42 80 50 41.3 79.7 49.7
I will be grateful for any help you can provide.
Best,
Mohamad
Last edited by Scrutinizer; 01-23-2016 at 04:18 PM..
Reason: CODE tags
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Discussion started by: rishifrnds
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LEARN ABOUT SUNOS
makesh
MAKESH(1) General Commands Manual MAKESH(1)NAME
makeSH - a .SH script maker
SYNOPSIS
makeSH files
DESCRIPTION
MakeSH examines one or more scripts and produces a .SH file that, when run under sh, will produce the original script. The .SH script so
produced has two sections containing code destined for the output. The first section has variable substitutions performed on it (taking
values from config.sh), while the second section does not. MakeSH does not know which variables you want to have substituted, so it puts
the whole script into the second section. It's up to you to insert any variable substitutions in the first section for any values you want
from config.sh.
You should run makeSH from within your top-level directory and use the relative path to the file as an argument, so that the "Extracting
..." line printed while running the produced .SH file later on will give that same path.
AUTHOR
Larry Wall <lwall@netlabs.com>
SEE ALSO pat(1), metaconfig(1), makedist(1).
BUGS
It could assume that variables from metaconfig's Glossary need to be initialized in the first section, but I'm too lazy to make it do that.
LOCAL MAKESH(1)
01-23-2016
Inserting shell script input data automatically from a text file
in this example only 49 75 48 are used as inputs, so i need to extract them automatically from the text file and insert them as inputs to the script)