awk '
NR == FNR {input[$1]; next}
{
split($5, a, "-")
if (a[1] in input) {
key = $4 OFS $5
n[key]++
sum[key] += $7
six[key] = $6
}
}
END {
for (key in n)
printf "%s %s bases with an average of %.1f\n", key, six[key], sum[key]/n[key]
}
' file2 file1
chr1:955543-955763 AGRN-6|gc=75 3 bases with an average of 1.3
Last edited by RudiC; 12-19-2015 at 01:35 PM..
Reason: added result line
Dear all,
Currently I writing a ksh script to perform some sql query. I already pipe results in a output file. But when I checked it, the output file is empty.
Below is part of the script that I wrote:
------------------------------------------------------------------------
function... (4 Replies)
I have a script that searches for specific information from log files.
#!/bin/sh
sed -n '/*C/,/END/p' /sn/log/OMlog* > crit.out
sed -n '/REPT INITIALIZATION/,/err:/p' /sn/log/OMlog* > switchcc.out
./start.awk /sn/log/OMlog* > ARs.out
./end.awk /sn/log/OMlog* > ARe.out
cat crit.out... (1 Reply)
Hi,
My script is running with no erros but not giving any output can anyonehelp.
#!/bin/ksh
. /home/application/bin/application.env
OUTFILE=Result.txt
PROD_PASSWORD=`${GET_PWD} -f ${PWD_FILE_PATH} -s ${PROD_SERVER} -u ${PROD_USER}`
echo "1)To get the book last loaded details "
read... (7 Replies)
Hello, I am VERY new to shell scripting here, so please go easy. I have an assignment that requires creating a script using bash shell, outputting all command line arguments that are not empty ones such as " ", and showing total number of arguments. I know how to show the total with $# and all... (6 Replies)
Hello all,
Here is what my bash script does: sums number columns, saves the tot in new column, outputs if tot >= threshold val:
> cat getnon0file.sh
#!/bin/bash
this="getnon0file.sh"
USAGE=$this"
InFile="xyz.38"
Min="0.05"
#
awk '{sum=0; for(n=2; n<=NF; n++){sum+=$n};... (4 Replies)
I am connecting to a device using telnet, I want my script to perform certain commands : ie- show device , show inventory..etc and write the output it sees from the terminal to a file.
this is what I have got :
#!/usr/bin/expect --
set running 1
spawn telnet <ip address>
expect ... (1 Reply)
Hello,
I'm trying to figure out a way to use a decode64 function in an embedded system who has few utilities, including busybox.
Right now have something like this (taken from "google base64-and-base85-encoding-awk-scripts" sorry, I'm not able to post urls yet)
_decode64()
{
&&... (4 Replies)
When I run the awk below, I get an error message
awk -v OFS='\t' '$(NF-1)=="Benign" || ($(NF-2) OFS $(NF-1))=="Likely Benign" {$(NF)=$(NF-2) OFS $(NF-1)} {print $0 }' input
awk: cmd. line:1: (FILENAME=VUS FNR=8) fatal: attempt to access field -1
input
Chr Start End Ref ... (6 Replies)
The below awk improved bu @MadeInGermany, works great as long as the input file has data in it in the below format:
input
chrX 25031028 25031925 chrX:25031028-25031925 ARX 631 18
chrX 25031028 25031925 chrX:25031028-25031925 ARX 632 14... (3 Replies)
Discussion started by: cmccabe
3 Replies
LEARN ABOUT CENTOS
keyctl_invalidate
KEYCTL_INVALIDATE(3) Linux Key Management Calls KEYCTL_INVALIDATE(3)NAME
keyctl_invalidate - Invalidate a key
SYNOPSIS
#include <keyutils.h>
long keyctl_invalidate(key_serial_t key);
DESCRIPTION
keyctl_invalidate() invalidates a key. The key is scheduled for immediate removal from all the keyrings that point to it, after which it
will be deleted. The key will be ignored by all searches once this function is called even if it is not yet fully dealt with.
The caller must have search permission on a key to be able to invalidate it.
RETURN VALUE
On success keyctl_invalidate() returns 0. On error, the value -1 will be returned and errno will have been set to an appropriate error.
ERRORS
ENOKEY The key specified is invalid.
EKEYEXPIRED
The key specified has expired.
EKEYREVOKED
The key specified had been revoked.
EACCES The key exists, but is not searchable by the calling process.
LINKING
This is a library function that can be found in libkeyutils. When linking, -lkeyutils should be specified to the linker.
SEE ALSO keyctl(1),
add_key(2),
keyctl(2),
request_key(2),
keyctl(3),
request-key(8)Linux 29 Aug 2013 KEYCTL_INVALIDATE(3)