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Top Forums Programming Python passing filename through argument Post 302958934 by goon12 on Tuesday 27th of October 2015 12:46:29 PM
Old 10-27-2015
The inputfile name is defined inside the function main, so it is out of scope when you're calling
Code:
overlap_data, contained_reads = get_overlap_data(inputfile)

, so you could just call get_overlap_data from inside of main, after handling all the args.
 

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PYDOC(1)						    BSD General Commands Manual 						  PYDOC(1)

NAME
pydoc -- the Python documentation tool SYNOPSIS
pydoc name pydoc -k keyword pydoc -p port pydoc -g pydoc -w module ... pydoc --help DESCRIPTION
pydoc shows text documentation on something related to python(1). The name argument may be the name of a Python keyword, topic, function, module, or package, or a dotted reference to a class or function within a module or module in a package. If name contains a '/', it is used as the path to a Python source file to document. If name is 'keywords', 'topics', or 'modules', a listing of these things is displayed. OPTIONS
-k keyword Search for a keyword in the synopsis lines of all available modules. -p port Start an HTTP server on the given port on the local machine. -g Pop up a graphical interface for finding and serving documentation. -w module ... Write out the HTML documentation for a module to a file in the current directory. If module contains a '/', it is treated as a filename; if it names a directory, documentation is written for all the contents. --help Prints out a help message. AUTHOR
Moshe Zadka, based on "pydoc --help" SEE ALSO
python(1) Dec 19, 2003
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