Sponsored Content
Operating Systems Linux How to remove lines without a particular string in either column? Post 302958099 by MadeInGermany on Monday 19th of October 2015 10:22:50 AM
Old 10-19-2015
With grep:
Code:
grep -v 'refseq:NP.*refseq:NP' file

Not asked here, but I want to mention that sed can delete the nth occurrence, here the 2nd:
Code:
sed 's/|refseq:NP[_0-9]*//2' file

---------- Post updated at 09:22 AM ---------- Previous update was at 08:55 AM ----------

Thanks to RavinderSingh, I see you want to do the opposite, then it's
Code:
grep 'refseq:NP.*refseq:NP' file

BTW you can use a back reference as follows
Code:
grep '\(refseq:NP\).*\1' file

This User Gave Thanks to MadeInGermany For This Post:
 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

How to remove a string from a specific column in a file

Hello, A basic query. How can I remove a string from a specific column. For example, remove "abcd" just from column 2 in example file: abcd abcd1 abcd abcd2 abcd abcd3 to get output: abcd 1 abcd 2 abcd 3 Thank you!:) (4 Replies)
Discussion started by: auburn
4 Replies

2. Shell Programming and Scripting

Remove lines based on column value

Hi All, I just need a quick fix here. I need to delete all lines containing "." in the 6th column. Input: 1 1055498 . G T 5.46 . 1 1902377 . C T 7.80 . 1 1031540 . A G 34.01 PASS 1 ... (2 Replies)
Discussion started by: Hkins552
2 Replies

3. Shell Programming and Scripting

Remove lines that match string at end of column

I have this: 301205 0000030000041.49000000.00 2011111815505 908 301205 0000020000029.10000000.00 2011111815505 962 301205 0000010000027.56000000.00 2011111815505 3083 312291 ... (2 Replies)
Discussion started by: herot
2 Replies

4. UNIX for Dummies Questions & Answers

[SOLVED] remove lines that have duplicate values in column two

Hi, I've got a file that I'd like to uniquely sort based on column 2 (values in column 2 begin with "comp"). I tried sort -t -nuk2,3 file.txtBut got: sort: multi-character tab `-nuk2,3' "man sort" did not help me out Any pointers? Input: Output: (5 Replies)
Discussion started by: pathunkathunk
5 Replies

5. UNIX for Dummies Questions & Answers

Remove lines contain certain string

i have file input aa,20120626 bb,45Cexpect to remove all lines when $2 doesn't end with 'C" output bb,45Ci tried this sed -i -nl -e '/\<C\>/ {p;} ' file1 but the result : sed illegal option -i (5 Replies)
Discussion started by: radius
5 Replies

6. UNIX for Dummies Questions & Answers

Remove lines in a positional file based on string value

Gurus, I am relatively new to Unix scripting and am struck with a problem in my script. I have positional input file which has a FLAG indicator in at position 11 in every record of the file. If the Flag has value =Y, then the record from the input needs to be written to a new file.However if... (3 Replies)
Discussion started by: gsam
3 Replies

7. Shell Programming and Scripting

Remove multiple lines from a particular string to particular string

Hi, I have a file containing the DDLs of tables in a schema. From that I need to remove all the lines from a starting string till a specific string. Here is an example. File1.txt ------------- CREATE TABLE "SCHEMA1"."LKP11_TBL_USERS" ( "ID" NUMBER(8,0) NOT NULL ENABLE, "USER_ID"... (3 Replies)
Discussion started by: satyaatcgi
3 Replies

8. Shell Programming and Scripting

Remove lines matching a substring in a specific column

Dear group, I have following input text file: Brit 2016 11 18 12 00 10 1.485,00 EUR Brit 2016 11 18 12 00 10 142,64 EUR Brit 2016 11 18 12 00 10 19,80 EUR Brit 2016 11 18 12 00 10 545,00 EUR Brit 2016 11 18 12 00 10 6.450,00 EUR... (3 Replies)
Discussion started by: gfhsd
3 Replies

9. Shell Programming and Scripting

Remove duplicate consecutive lines with specific string

Hello, I'm trying to remove the duplicate consecutive lines with specific string "WARNING". File.txt abc; WARNING 2345 WARNING 2345 WARNING 2345 WARNING 2345 WARNING 2345 bcd; abc; 123 123 123 WARNING 1234 WARNING 2345 WARNING 2345 efgh; (6 Replies)
Discussion started by: Mannu2525
6 Replies

10. UNIX for Beginners Questions & Answers

Remove newline character from column spread over multiple lines in a file

Hi, I came across one issue recently where output from one of the columns of the table from where i am creating input file has newline characters hence, record in the file is spread over multiple lines. Fields in the file are separated by pipe (|) delimiter. As header will never have newline... (4 Replies)
Discussion started by: Prathmesh
4 Replies
ZGREP(1)						      General Commands Manual							  ZGREP(1)

NAME
zgrep - search possibly compressed files for a regular expression SYNOPSIS
zgrep [ grep_options ] [ -e ] pattern filename... DESCRIPTION
Zgrep invokes grep on compressed or gzipped files. These grep options will cause zgrep to terminate with an error code: (-[drRzZ]|--di*|--exc*|--inc*|--rec*|--nu*). All other options specified are passed directly to grep. If no file is specified, then the standard input is decompressed if necessary and fed to grep. Otherwise the given files are uncompressed if necessary and fed to grep. If the GREP environment variable is set, zgrep uses it as the grep program to be invoked. EXIT CODE
2 - An option that is not supported was specified. AUTHOR
Charles Levert (charles@comm.polymtl.ca) SEE ALSO
grep(1), gzexe(1), gzip(1), zdiff(1), zforce(1), zmore(1), znew(1) ZGREP(1)
All times are GMT -4. The time now is 07:26 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy