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Top Forums Shell Programming and Scripting New code for modifying text files in a folder Post 302956421 by kylle345 on Tuesday 29th of September 2015 05:47:10 PM
Old 09-29-2015
The Marker line does exist and the name does exist but it not always mmm or jjj. They vary each time. I just need them to be replaced with the names on the file.

Hope that makes sense.

Quote:
Originally Posted by Aia
I created the code based on your first post example:

Code:
Kinship Analysis Report --- Likelihood Ratio
Marker	mmm.fsa			jjj.fsa			Parent/Child (LR)	
CSF1PO	10	12		10	12		1.90183	
TPOX	8	9		9	11		0.97656	
TH01	6	9.3		7	9.3		3.42466	
vWA	18			18	19		4.34783	
D16S539	10	12		9	10		2.33645	
D7S820	10	12		9	12		2.50000	
D13S317	11	12		11	12		1.48845	
D5S818	10	11		11	13		1.02459	
FGA	19	25		19	24		3.62319	
D8S1179	10	14		10	12		10.41667	
D18S51	12			12			17.24138	
D21S11	28	31		29	31		3.16456	
D3S1358	16	17		17			2.76243	
PENTA E	12	14		11	12		2.01613	
PENTA D	10	12		10	12		4.53612
							1.28E+07

I suspect there are discrepancies between what you posted and what you actually have. Let me ask you. Does mmm.fsa jjj.fsa, actually exist in the real file? Is this "Marker" line, in red, the second line of the file?
 

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POLYMERGE(1gv)															    POLYMERGE(1gv)

NAME
polymerge - merge coincident vertices, collinear edges, coplanar faces in an OOGL OFF object SYNOPSIS
polymerge [-v vertex_thresh] [-e edge_thresh] [-f face_thresh] [-V] [-E] [-F] [-d] [-b] [inputfile.off] DESCRIPTION
Polymerge eliminates redundancies from polyhedral objects in OOGL's OFF format, and writes another OFF object to its standard output. (Optionally it can produce instead an input file for Brakke's Evolver.) Specifically, it combines nearly-coincident vertices, nearly- collinear edges, and nearly-coplanar faces. Vertices which aren't used on any face are deleted, as are faces with less than three ver- tices. Thresholds for approximate equality are adjustable from the command line. Options are: -v vertex_thresh Merge vertices when they're closer than vertex_thresh apart; the default is .00001. -V Don't attempt to merge vertices. -e edge_thresh Merge edges where |sin(vertex_angle)| < edge_thresh; the default is When edges are merged, the corresponding vertex is removed. -E Don't attempt to merge edges. (4OFF edges are never merged.) -f face_thresh Merge faces sharing an edge where the faces are nearly coplanar: when |sin(angle_between_face_normal_vectors)| < face_thresh. The default is .03, or about two degrees. Note that merging can create faces which are concave polygons. -F Don't attempt to merge faces. (4OFF faces are never merged.) -b Produce an output file in .fe format for Brakke's Surface Evolver, instead of a new OFF file. -d Include debugging information as comments in the new OFF object. The comments indicate which vertices and faces in the original object correspond to which in the new one. Messages include: # Vtx nnn->mmm Merged vertices nnn and mmm (both indices in the original object). # Merged face nnn into mmm (vertices vvv www) n1.n2 s Faces nnn and mmm in the original object were merged; their common edge joined original vertices vvv and www. The cosine of the angle between the face normals was s. vertex coordinates # newvertno [order] # oldvertno Each vertex written appears with its new index, its order (number of edges touching that vertex), and its old index (index of a cor- responding vertex in the original object). face description # oldvertno ... For each new face, with N vertices after reduction, the comment indicates N corresponding vertices in the original object. AUTHOR
Stuart Levy, Geometry Center, University of Minnesota SEE ALSO
anytooff(1), offconsol(1) BUGS
Coplanar faces are merged even if they were assigned different colors. Should be able to handle binary OFF objects, but this hasn't been tested. Geometry Center 25 July 1993 POLYMERGE(1gv)
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