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Full Discussion: Extracting data from specific rows and columns from multiple csv files
Top Forums Shell Programming and Scripting Extracting data from specific rows and columns from multiple csv files Post 302951403 by RudiC on Thursday 6th of August 2015 02:27:14 AM
Old 08-06-2015
Try
Code:
awk -F, -v HD="Tube Name,Early Apoptosis,Late Apoptosis,Live,Necrosis" '
BEGIN           {for (N=i=split (HD, T); i>0; i--) SRCH[T[i]]
                 for (i=1; i<=N; i++) printf "%s\t", T[i]
                 print ""
                }
FNR==1 && L     {for (i=1; i<=N; i++) printf "%s\t", PR[T[i]]
                 print ""
                 delete PR
                }

$1 in SRCH      {PR[$1]=$NF
                 L=1
                }
END             {for (i=1; i<=N; i++) printf "%s\t", PR[T[i]]
                 print ""
                }
'  file[12]
Tube Name       Early Apoptosis Late Apoptosis  Live    Necrosis
Unstained Control       0.5     0.0     99.5    0.0
OA_10uM 6.8     7.6     85.3    0.2

 

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LEARN ABOUT DEBIAN

csv2po

csv2po(1)						      Translate Toolkit 1.9.0							 csv2po(1)

NAME

       csv2po - convert Comma-Separated Value (.csv) files to Gettext PO localization files

SYNOPSIS

       csv2po  [--version]  [-h|--help]  [--manpage]  [--progress  PROGRESS]  [--errorlevel  ERRORLEVEL] [-i|--input] INPUT [-x|--exclude EXCLUDE]
       [-o|--output] OUTPUT [-t|--template TEMPLATE] [--charset CHARSET] [--columnorder] [--duplicates DUPLICATESTYLE]

DESCRIPTION

       See: http://translate.sourceforge.net/wiki/toolkit/csv2po for examples and usage instructions

OPTIONS

       --version
	      show program's version number and exit

       -h/--help
	      show this help message and exit

       --manpage
	      output a manpage based on the help

       --progress
	      show progress as: dots, none, bar, names, verbose

       --errorlevel
	      show errorlevel as: none, message, exception, traceback

       -i/--input
	      read from INPUT in csv format

       -x/--exclude
	      exclude names matching EXCLUDE from input paths

       -o/--output
	      write to OUTPUT in po, pot formats

       -t/--template
	      read from TEMPLATE in pot, po, pot formats

       --charset
	      set charset to decode from csv files

       --columnorder
	      specify the order and position of columns (location,source,target)

       --duplicates
	      what to do with duplicate strings (identical source text): merge, msgctxt (default: 'msgctxt')

							      Translate Toolkit 1.9.0							 csv2po(1)
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