Login or Register to Ask a Question and Join Our Community

Sponsored Content
Full Discussion: Extracting data from specific rows and columns from multiple csv files
Top Forums Shell Programming and Scripting Extracting data from specific rows and columns from multiple csv files Post 302951392 by pawannoel on Wednesday 5th of August 2015 11:26:30 PM
Old 08-06-2015
ok
so I'm providing 2 new files : file3 and file4 with your suggestions
file3
Code:
Experiment Name,ABC_07/28/15
Specimen Name,Specimen_001
Tube Name,Unstained Control
Record Date,"Jul 28, 2015 2:42:33 PM"
$OP,XYZ 
GUID,abc
Population,#Events,%Parent
All Events,15282,
P1,14744,96.5
Early Apoptosis,71,0.5
Late Apoptosis,1,0.0
Live,14672,99.5
Necrosis,0,0.0

file4
Code:
Experiment Name,ABC_07/28/15
Specimen Name,Specimen_001
Tube Name,OA_10uM
Record Date,"Jul 28, 2015 2:52:36 PM"
$OP,KLM 
GUID,efg 
Population,#Events,%Parent
All Events,12156,
P1,11821,97.2
Early Apoptosis,806,6.8
Late Apoptosis,901,7.6
Live,10087,85.3
Necrosis,27,0.2

Thanks
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Perl - extracting data from .csv files

PROJECT: Extracting data from an employee timesheet. The timesheets are done in excel (for user ease) and then converted to .csv files that look like this (see color code key below): ,,,,,,,,,,,,,,,,,,, 9/14/2003,<-- Week Ending,,,,,,,,,,,,,,,,,, Craig Brennan,,,,,,,,,,,,,,,,,,,... (3 Replies)
Discussion started by: kregh99
3 Replies

2. UNIX for Dummies Questions & Answers

Convert Rows to Columns Specific Data

I have this data M36 AREA INFORMATION MDN = 0485009346 ESN = H'15fda0b0 TYPE = HLR RESULT = NOK REASON = UNRECOGNIZED MIN COMPLETED AREA INFORMATION MDN = 0498044402 ESN = H'15fdac11 TYPE... (2 Replies)
Discussion started by: krabu
2 Replies

3. UNIX for Dummies Questions & Answers

Extracting columns from multiple files with awk

hi everyone! I already posted it in scripts, I'm sorry, it's doubled I'd like to extract a single column from 5 different files and put them together in an output file. I saw a similar question for 2 input files, and the line of code workd very well, the code is: awk 'NR==FNR{a=$2; next}... (1 Reply)
Discussion started by: orcaja
1 Replies

4. Shell Programming and Scripting

Extracting columns from multiple files with awk

hi everyone! I'd like to extract a single column from 5 different files and put them together in an output file. I saw a similar question for 2 input files, and the line of code workd very well, the code is: awk 'NR==FNR{a=$2; next} {print a, $2}' file1 file2 I added the file3, file4 and... (10 Replies)
Discussion started by: orcaja
10 Replies

5. UNIX for Dummies Questions & Answers

Extracting data from PDF files into CSV file

Hi, I have several hundreds of PDFfiles number 01.pdf, 02.pdf, 03.pdf, etc in one folder. These are vey long documentd with a lot of information (text, tables, figures, etc). I need to extract the information asociated with one disease in particular (Varicella). The information I need to... (5 Replies)
Discussion started by: Xterra
5 Replies

6. Shell Programming and Scripting

extracting columns falling within specific ranges for multiple files

Hi, I need to create weekly files from daily records stored in individual monthly filenames from 1999-2010. my sample file structure is like the ones below: daily record stored per month: 199901.xyz, 199902.xyz, 199903.xyz, 199904.xyz ...199912.xyz records inside 199901.xyz (original data... (4 Replies)
Discussion started by: ida1215
4 Replies

7. UNIX for Dummies Questions & Answers

Extracting data between specific lines, multiple times

I need help extracting specific lines in a text file. The file looks like this: POSITION TOTAL-FORCE (eV/Angst) ----------------------------------------------------------------------------------- 1.86126 1.86973 1.86972 ... (14 Replies)
Discussion started by: captainalright
14 Replies

8. Shell Programming and Scripting

Deleting all the fields(columns) from a .csv file if all rows in that columns are blanks

Hi Friends, I have come across some files where some of the columns don not have data. Key, Data1,Data2,Data3,Data4,Data5 A,5,6,,10,, A,3,4,,3,, B,1,,4,5,, B,2,,3,4,, If we see the above data on Data5 column do not have any row got filled. So remove only that column(Here Data5) and... (4 Replies)
Discussion started by: ks_reddy
4 Replies

9. Shell Programming and Scripting

Compare 2 csv files by columns, then extract certain columns of matcing rows

Hi all, I'm pretty much a newbie to UNIX. I would appreciate any help with UNIX coding on comparing two large csv files (greater than 10 GB in size), and output a file with matching columns. I want to compare file1 and file2 by 'id' and 'chain' columns, then extract exact matching rows'... (5 Replies)
Discussion started by: bkane3
5 Replies

10. Shell Programming and Scripting

Extracting specific files from multiple .tgz files

Hey, I have number of .tgz files and want to extract the file with the ending *results.txt from each one. I have tried for file in *.tgz; do tar --wildcards -zxf $file *results.txt; doneas well as list=$(ls *.tgz) for i in $list; do tar --wildcards -zxvf $i *.results.txt; done... (1 Reply)
Discussion started by: jfern
1 Replies

LEARN ABOUT DEBIAN

sdl::gfx::imagefilter

pods::SDL::GFX::ImageFilter(3pm)			User Contributed Perl Documentation			  pods::SDL::GFX::ImageFilter(3pm)

NAME

       SDL::GFX::ImageFilter - image filtering functions

CATEGORY

       TODO, GFX

METHODS

   MMX_detect
       int gfx_image_MMX_detect()      CODE:	       SDL_imageFilterMMXdetect();

   MMX_off
       void gfx_image_MMX_off()      CODE:	     SDL_imageFilterMMXoff();

   MMX_on
       void gfx_image_MMX_on()	    CODE:	    SDL_imageFilterMMXon();

   add
       int gfx_image_add(Src1, Src2, Dest, length)	unsigned char *Src1	 unsigned char *Src2	  unsigned char *Dest	   int length
	    CODE:	    RETVAL = SDL_imageFilterAdd(Src1, Src2, Dest, length);	OUTPUT: 	  RETVAL

   mean
       int gfx_image_mean(Src1, Src2, Dest, length)	 unsigned char *Src1	  unsigned char *Src2	   unsigned char *Dest	    int length
	    CODE:	    RETVAL = SDL_imageFilterMean(Src1, Src2, Dest, length);	 OUTPUT:	   RETVAL

   sub
       int gfx_image_sub(Src1, Src2, Dest, length)	unsigned char *Src1	 unsigned char *Src2	  unsigned char *Dest	   int length
	    CODE:	    RETVAL = SDL_imageFilterSub(Src1, Src2, Dest, length);	OUTPUT: 	  RETVAL

   abs_diff
       int gfx_image_abs_diff(Src1, Src2, Dest, length)      unsigned char *Src1      unsigned char *Src2      unsigned char *Dest	int length
	    CODE:	    RETVAL = SDL_imageFilterAbsDiff(Src1, Src2, Dest, length);	    OUTPUT:	      RETVAL

   mult
       int gfx_image_mult(Src1, Src2, Dest, length)	 unsigned char *Src1	  unsigned char *Src2	   unsigned char *Dest	    int length
	    CODE:	    RETVAL = SDL_imageFilterMult(Src1, Src2, Dest, length);	 OUTPUT:	   RETVAL

   mult_nor
       int gfx_image_mult_nor(Src1, Src2, Dest, length)      unsigned char *Src1      unsigned char *Src2      unsigned char *Dest	int length
	    CODE:	    RETVAL = SDL_imageFilterMultNor(Src1, Src2, Dest, length);	    OUTPUT:	      RETVAL

   mult_div_by_2
       int gfx_image_mult_div_by_2(Src1, Src2, Dest, length)	  unsigned char *Src1	   unsigned char *Src2	    unsigned char *Dest      int
       length	   CODE:	   RETVAL = SDL_imageFilterMultDivby2(Src1, Src2, Dest, length);      OUTPUT:		RETVAL

   mult_div_by_4
       int gfx_image_mult_div_by_4(Src1, Src2, Dest, length)	  unsigned char *Src1	   unsigned char *Src2	    unsigned char *Dest      int
       length	   CODE:	   RETVAL = SDL_imageFilterMultDivby4(Src1, Src2, Dest, length);      OUTPUT:		RETVAL

   bit_and
       int gfx_image_bit_and(Src1, Src2, Dest, length)	    unsigned char *Src1      unsigned char *Src2      unsigned char *Dest      int length
	    CODE:	    RETVAL = SDL_imageFilterBitAnd(Src1, Src2, Dest, length);	   OUTPUT:	     RETVAL

   bit_or
       int gfx_image_bit_or(Src1, Src2, Dest, length)	   unsigned char *Src1	    unsigned char *Src2      unsigned char *Dest      int length
	    CODE:	    RETVAL = SDL_imageFilterBitOr(Src1, Src2, Dest, length);	  OUTPUT:	    RETVAL

   div
       int gfx_image_div(Src1, Src2, Dest, length)	unsigned char *Src1	 unsigned char *Src2	  unsigned char *Dest	   int length
	    CODE:	    RETVAL = SDL_imageFilterDiv(Src1, Src2, Dest, length);	OUTPUT: 	  RETVAL

   bit_negation
       int gfx_image_bit_negation(Src1, Dest, length)	   unsigned char *Src1	    unsigned char *Dest      int length      CODE:
		 RETVAL = SDL_imageFilterBitNegation(Src1, Dest, length);      OUTPUT:		 RETVAL

   add_byte
       int gfx_image_add_byte(Src1, Dest, length, C)	  unsigned char *Src1	   unsigned char *Dest	    int length	    unsigned char C
	    CODE:	    RETVAL = SDL_imageFilterAddByte(Src1, Dest, length, C);	 OUTPUT:	   RETVAL

   add_uint
       int gfx_image_add_uint(Src1, Dest, length, C)	  unsigned char *Src1	   unsigned char *Dest	    int length	    unsigned int C
	    CODE:	    RETVAL = SDL_imageFilterAddUint(Src1, Dest, length, C);	 OUTPUT:	   RETVAL

   add_byte_to_half
       int gfx_image_add_byte_to_half(Src1, Dest, length, C)	  unsigned char *Src1	   unsigned char *Dest	    int length	    unsigned char
       C      CODE:	      RETVAL = SDL_imageFilterAddByteToHalf(Src1, Dest, length, C);	 OUTPUT:	   RETVAL

   sub_byte
       int gfx_image_sub_byte(Src1, Dest, length, C)	  unsigned char *Src1	   unsigned char *Dest	    int length	    unsigned char C
	    CODE:	    RETVAL = SDL_imageFilterSubByte(Src1, Dest, length, C);	 OUTPUT:	   RETVAL

   sub_uint
       int gfx_image_sub_uint(Src1, Dest, length, C)	  unsigned char *Src1	   unsigned char *Dest	    int length	    unsigned int C
	    CODE:	    RETVAL = SDL_imageFilterSubUint(Src1, Dest, length, C);	 OUTPUT:	   RETVAL

   shift_right
       int gfx_image_shift_right(Src1, Dest, length, N)      unsigned char *Src1      unsigned char *Dest      int length      unsigned char N
	    CODE:	    RETVAL = SDL_imageFilterShiftRight(Src1, Dest, length, N);	    OUTPUT:	      RETVAL

   shift_right_uint
       int gfx_image_shift_right_uint(Src1, Dest, length, N)	  unsigned char *Src1	   unsigned char *Dest	    int length	    unsigned char
       N      CODE:	      RETVAL = SDL_imageFilterShiftRightUint(Src1, Dest, length, N);	  OUTPUT:	    RETVAL

   mult_by_byte
       int gfx_image_mult_by_byte(Src1, Dest, length, C)      unsigned char *Src1      unsigned char *Dest	int length	unsigned char C
	    CODE:	    RETVAL = SDL_imageFilterMultByByte(Src1, Dest, length, C);	    OUTPUT:	      RETVAL

   shift_right_and_mult_by_byte
       int gfx_image_shift_right_and_mult_by_byte(Src1, Dest, length, N, C)	 unsigned char *Src1	  unsigned char *Dest	   int length
	    unsigned char N	 unsigned char C      CODE:	      RETVAL = SDL_imageFilterShiftRightAndMultByByte(Src1, Dest, length, N, C);
	    OUTPUT:	      RETVAL

   shift_left_byte
       int gfx_image_shift_left_byte(Src1, Dest, length, N)	 unsigned char *Src1	  unsigned char *Dest	   int length	   unsigned char N
	    CODE:	    RETVAL = SDL_imageFilterShiftLeftByte(Src1, Dest, length, N);      OUTPUT:		 RETVAL

   shift_left_uint
       int gfx_image_shift_left_uint(Src1, Dest, length, N)	 unsigned char *Src1	  unsigned char *Dest	   int length	   unsigned char N
	    CODE:	    RETVAL = SDL_imageFilterShiftLeftUint(Src1, Dest, length, N);      OUTPUT:		 RETVAL

   shift_left
       int gfx_image_shift_left(Src1, Dest, length, N)	    unsigned char *Src1      unsigned char *Dest      int length      unsigned char N
	    CODE:	    RETVAL = SDL_imageFilterShiftLeft(Src1, Dest, length, N);	   OUTPUT:	     RETVAL

   binarize_using_threshold
       int gfx_image_binarize_using_threshold(Src1, Dest, length, T)	  unsigned char *Src1	   unsigned char *Dest	    int length
	    unsigned char T	 CODE:		 RETVAL = SDL_imageFilterBinarizeUsingThreshold(Src1, Dest, length, T);      OUTPUT:
		 RETVAL

   clip_to_range
       int gfx_image_clip_to_range(Src1, Dest, length, Tmin, Tmax)	unsigned char *Src1	 unsigned char *Dest	  int length	  unsigned
       char Tmin      unsigned char Tmax      CODE:	      RETVAL = SDL_imageFilterClipToRange(Src1, Dest, length, Tmin, Tmax);	OUTPUT:
		 RETVAL

   normalize_linear
       int gfx_image_normalize_linear(Src1, Dest, length, Cmin, Cmax, Nmin, Nmax)      unsigned char *Src1	unsigned char *Dest	 int
       length	   int Cmin	 int Cmax      int Nmin      int Nmax	   CODE:	   RETVAL = SDL_imageFilterNormalizeLinear(Src1, Dest,
       length, Cmin, Cmax, Nmin, Nmax);      OUTPUT:	       RETVAL

   convolve_kernel_3x3_divide
       int gfx_image_convolve_kernel_3x3_divide(Src, Dest, rows, columns, Kernel, Divisor)	unsigned char *Src	unsigned char *Dest
	    int rows	  int columns	   Sint16 *Kernel      unsigned char Divisor	  CODE: 	  RETVAL =
       SDL_imageFilterConvolveKernel3x3Divide(Src, Dest, rows, columns, Kernel, Divisor);      OUTPUT:		 RETVAL

   convolve_kernel_5x5_divide
       int gfx_image_convolve_kernel_5x5_divide(Src, Dest, rows, columns, Kernel, Divisor)	unsigned char *Src	unsigned char *Dest
	    int rows	  int columns	   Sint16 *Kernel      unsigned char Divisor	  CODE: 	  RETVAL =
       SDL_imageFilterConvolveKernel5x5Divide(Src, Dest, rows, columns, Kernel, Divisor);      OUTPUT:		 RETVAL

   convolve_kernel_7x7_divide
       int gfx_image_convolve_kernel_7x7_divide(Src, Dest, rows, columns, Kernel, Divisor)	unsigned char *Src	unsigned char *Dest
	    int rows	  int columns	   Sint16 *Kernel      unsigned char Divisor	  CODE: 	  RETVAL =
       SDL_imageFilterConvolveKernel7x7Divide(Src, Dest, rows, columns, Kernel, Divisor);      OUTPUT:		 RETVAL

   convolve_kernel_9x9_divide
       int gfx_image_convolve_kernel_9x9_divide(Src, Dest, rows, columns, Kernel, Divisor)	unsigned char *Src	unsigned char *Dest
	    int rows	  int columns	   Sint16 *Kernel      unsigned char Divisor	  CODE: 	  RETVAL =
       SDL_imageFilterConvolveKernel9x9Divide(Src, Dest, rows, columns, Kernel, Divisor);      OUTPUT:		 RETVAL

   convolve_kernel_3x3_shift_right
       int gfx_image_convolve_kernel_3x3_shift_right(Src, Dest, rows, columns, Kernel, NRightShift)	 unsigned char *Src	 unsigned char
       *Dest	  int rows	int columns	 Sint16 *Kernel      unsigned char NRightShift	    CODE:	    RETVAL =
       SDL_imageFilterConvolveKernel3x3ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift);      OUTPUT:		 RETVAL

   convolve_kernel_5x5_shift_right
       int gfx_image_convolve_kernel_5x5_shift_right(Src, Dest, rows, columns, Kernel, NRightShift)	 unsigned char *Src	 unsigned char
       *Dest	  int rows	int columns	 Sint16 *Kernel      unsigned char NRightShift	    CODE:	    RETVAL =
       SDL_imageFilterConvolveKernel5x5ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift);      OUTPUT:		 RETVAL

   convolve_kernel_7x7_shift_right
       int gfx_image_convolve_kernel_7x7_shift_right(Src, Dest, rows, columns, Kernel, NRightShift)	 unsigned char *Src	 unsigned char
       *Dest	  int rows	int columns	 Sint16 *Kernel      unsigned char NRightShift	    CODE:	    RETVAL =
       SDL_imageFilterConvolveKernel7x7ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift);      OUTPUT:		 RETVAL

   convolve_kernel_9x9_shift_right
       int gfx_image_convolve_kernel_9x9_shift_right(Src, Dest, rows, columns, Kernel, NRightShift)	 unsigned char *Src	 unsigned char
       *Dest	  int rows	int columns	 Sint16 *Kernel      unsigned char NRightShift	    CODE:	    RETVAL =
       SDL_imageFilterConvolveKernel9x9ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift);      OUTPUT:		 RETVAL

   sobel_x
       int gfx_image_sobel_x(Src, Dest, rows, columns)	    unsigned char *Src	    unsigned char *Dest      int rows	   int columns	    CODE:
		 RETVAL = SDL_imageFilterSobelX(Src, Dest, rows, columns);	OUTPUT: 	  RETVAL

   sobel_x_shift_right
       int gfx_image_sobel_x_shift_right(Src, Dest, rows, columns, NRightShift)      unsigned char *Src      unsigned char *Dest      int rows
	    int columns      unsigned char NRightShift	    CODE:	    RETVAL = SDL_imageFilterSobelXShiftRight(Src, Dest, rows, columns,
       NRightShift);	  OUTPUT:	    RETVAL

   align_stack
       void gfx_image_align_stack()	 CODE:		 SDL_imageFilterAlignStack();

   restore_stack
       void gfx_image_restore_stack()	   CODE:	   SDL_imageFilterRestoreStack();

AUTHORS

       See "AUTHORS" in SDL.

perl v5.14.2							    2012-05-28					  pods::SDL::GFX::ImageFilter(3pm)
All times are GMT -4. The time now is 03:45 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy