Extracting data from specific rows and columns from multiple csv files
I have a series of csv files in the following format
eg file1
file2
I would like to extract Tube names ( 3rd row, 2nd column) and Last 4 rows {labels in column 1 only from 1st file and values in columns 3 from all files and write to to an output file.
expected output is :
Can someone help me figure out the code ?
Thanks a ton
Moderator's Comments:
Please use CODE tags (not ICODE tags) for all multiline sample input, output, and code segments.
Last edited by Don Cragun; 08-06-2015 at 12:02 AM..
Reason: Change ICODE tags to CODE tags.
PROJECT: Extracting data from an employee timesheet. The timesheets are done in excel (for user ease) and then converted to .csv files that look like this (see color code key below):
,,,,,,,,,,,,,,,,,,,
9/14/2003,<-- Week Ending,,,,,,,,,,,,,,,,,,
Craig Brennan,,,,,,,,,,,,,,,,,,,... (3 Replies)
I have this data
M36 AREA INFORMATION
MDN = 0485009346
ESN = H'15fda0b0
TYPE = HLR
RESULT = NOK
REASON = UNRECOGNIZED MIN
COMPLETED
AREA INFORMATION
MDN = 0498044402
ESN = H'15fdac11
TYPE... (2 Replies)
hi everyone!
I already posted it in scripts, I'm sorry, it's doubled
I'd like to extract a single column from 5 different files and put them together in an output file. I saw a similar question for 2 input files, and the line of code workd very well, the code is:
awk 'NR==FNR{a=$2; next}... (1 Reply)
hi everyone!
I'd like to extract a single column from 5 different files and put them together in an output file. I saw a similar question for 2 input files, and the line of code workd very well, the code is:
awk 'NR==FNR{a=$2; next} {print a, $2}' file1 file2
I added the file3, file4 and... (10 Replies)
Hi,
I have several hundreds of PDFfiles number 01.pdf, 02.pdf, 03.pdf, etc in one folder. These are vey long documentd with a lot of information (text, tables, figures, etc). I need to extract the information asociated with one disease in particular (Varicella). The information I need to... (5 Replies)
Hi, I need to create weekly files from daily records stored in individual monthly filenames from 1999-2010. my sample file structure is like the ones below:
daily record stored per month:
199901.xyz, 199902.xyz, 199903.xyz, 199904.xyz ...199912.xyz
records inside 199901.xyz (original data... (4 Replies)
I need help extracting specific lines in a text file. The file looks like this:
POSITION TOTAL-FORCE (eV/Angst)
-----------------------------------------------------------------------------------
1.86126 1.86973 1.86972 ... (14 Replies)
Hi Friends,
I have come across some files where some of the columns don not have data.
Key, Data1,Data2,Data3,Data4,Data5
A,5,6,,10,,
A,3,4,,3,,
B,1,,4,5,,
B,2,,3,4,,
If we see the above data on Data5 column do not have any row got filled. So remove only that column(Here Data5) and... (4 Replies)
Hi all, I'm pretty much a newbie to UNIX. I would appreciate any help with UNIX coding on comparing two large csv files (greater than 10 GB in size), and output a file with matching columns.
I want to compare file1 and file2 by 'id' and 'chain' columns, then extract exact matching rows'... (5 Replies)
Hey,
I have number of .tgz files and want to extract the file with the ending *results.txt from each one.
I have tried
for file in *.tgz; do tar --wildcards -zxf $file *results.txt; doneas well as
list=$(ls *.tgz)
for i in $list; do tar --wildcards -zxvf $i *.results.txt; done... (1 Reply)
Discussion started by: jfern
1 Replies
LEARN ABOUT REDHAT
csv
csv(n) CSV processing csv(n)
NAME
csv - Procedures to handle CSV data.
SYNOPSIS
package require Tcl 8.3
package require csv ?0.3?
::csv::join values {sepChar ,}
::csv::joinlist values {sepChar ,}
::csv::read2matrix chan m {sepChar ,} {expand none}
::csv::read2queue chan q {sepChar ,}
::csv::report cmd matrix ?chan?
::csv::split line {sepChar ,}
::csv::split2matrix m line {sepChar ,} {expand none}
::csv::split2queue q line {sepChar ,}
::csv::writematrix m chan {sepChar ,}
::csv::writequeue q chan {sepChar ,}
DESCRIPTION
The csv package provides commands to manipulate information in CSV FORMAT (CSV = Comma Separated Values).
COMMANDS
The following commands are available:
::csv::join values {sepChar ,}
Takes a list of values and returns a string in CSV format containing these values. The separator character can be defined by the
caller, but this is optional. The default is ",".
::csv::joinlist values {sepChar ,}
Takes a list of lists of values and returns a string in CSV format containing these values. The separator character can be defined
by the caller, but this is optional. The default is ",". Each element of the outer list is considered a record, these are separated
by newlines in the result. The elements of each record are formatted as usual (via ::csv::join).
::csv::read2matrix chan m {sepChar ,} {expand none}
A wrapper around ::csv::split2matrix (see below) reading CSV-formatted lines from the specified channel (until EOF) and adding them
to the given matrix. For an explanation of the expand argument see ::csv::split2matrix.
::csv::read2queue chan q {sepChar ,}
A wrapper around ::csv::split2queue (see below) reading CSV-formatted lines from the specified channel (until EOF) and adding them
to the given queue.
::csv::report cmd matrix ?chan?
A report command which can be used by the matrix methods format 2string and format 2chan. For the latter this command delegates the
work to ::csv::writematrix. cmd is expected to be either printmatrix or printmatrix2channel. The channel argument, chan, has to be
present for the latter and must not be present for the first.
::csv::split line {sepChar ,}
converts a line in CSV format into a list of the values contained in the line. The character used to separate the values from each
other can be defined by the caller, via sepChar, but this is optional. The default is ",".
::csv::split2matrix m line {sepChar ,} {expand none}
The same as ::csv::split, but appends the resulting list as a new row to the matrix m, using the method add row. The expansion mode
specified via expand determines how the command handles a matrix with less columns than contained in line. The allowed modes are:
none This is the default mode. In this mode it is the responsibility of the caller to ensure that the matrix has enough columns to
contain the full line. If there are not enough columns the list of values is silently truncated at the end to fit.
empty In this mode the command expands an empty matrix to hold all columns of the specified line, but goes no further. The overall
effect is that the first of a series of lines determines the number of columns in the matrix and all following lines are
truncated to that size, as if mode none was set.
auto In this mode the command expands the matrix as needed to hold all columns contained in line. The overall effect is that after
adding a series of lines the matrix will have enough columns to hold all columns of the longest line encountered so far.
::csv::split2queue q line {sepChar ,}
The same as ::csv::split, but appending the resulting list as a single item to the queue q, using the method put.
::csv::writematrix m chan {sepChar ,}
A wrapper around ::csv::join taking all rows in the matrix m and writing them CSV formatted into the channel chan.
::csv::writequeue q chan {sepChar ,}
A wrapper around ::csv::join taking all items in the queue q (assumes that they are lists) and writing them CSV formatted into the
channel chan.
FORMAT
Each record of a csv file (comma-separated values, as exported e.g. by Excel) is a set of ASCII values separated by ",". For other lan-
guages it may be ";" however, although this is not important for this case (The functions provided here allow any separator character).
If a value contains itself the separator ",", then it (the value) is put between "".
If a value contains ", it is replaced by "".
EXAMPLE
The record
123,"123,521.2","Mary says ""Hello, I am Mary"""
is parsed as follows:
a) 123
b) 123,521.2
c) Mary says "Hello, I am Mary"
SEE ALSO
matrix, queue
KEYWORDS
csv, matrix, queue, package, tcllib
csv 0.3 csv(n)