Sponsored Content
Top Forums Shell Programming and Scripting Yes or No selection within bash function Post 302947986 by cmccabe on Wednesday 24th of June 2015 01:22:21 PM
Old 06-24-2015
Yes or No selection within bash function

I need to add a selection within the bash function below and am having some trouble doing so.

Code:
phox2b() {
    printf "\n\n"
    printf "What is the id of the patient getting Phox2B analysis  : "; read id
    printf "Is this an intronic variant?  Y/N "; read match_choice

    case "$match_choice" in
        [yY]) id="${id}"; 
         printf "%s \n" "Please enter variant(s), use a comma between multiple: "
OLDIFS=$IFS
IFS=","
read -a variants
for (( i = 0; i < ${#variants[@]}; i++ ))
	do
	printf "NM_003924.3:%s\n" "${variants[$i]}" >> c:/Users/cmccabe/Desktop/Python27/out.txt
	done
IFS=$OLDIFS

        [nN]) id="${id}";  
	printf "Please enter the coding variant the following is an example"
	echo " c.274G>T"
	
        printf "variant(s), use a comma between multiple: "; IFS="," read -a variant
        
        [ -z "$id" ] && printf "\n No ID supplied. Leaving match function." && sleep 2 && return
        [ "$id" = "end" ] && printf "\n Leaving match function." && sleep 2 && return

        for ((i=0; i<${#variant[@]}; i++))
              do printf "NM_003924.3:%s\n" ${variant[$i]} >> c:/Users/cmccabe/Desktop/Python27/out.txt
        done
	add2text ${id}.txt
	additional
}

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Need assistance with bash function

Hi all! I need a little help with an imbedded fuction I am trying to write. What I am trying to do is go to a series of hosts and get the contents of an XML file, storing some of the data, along with the name of the host it was gathered from. My intent is to store this in an array for later... (1 Reply)
Discussion started by: _jade_
1 Replies

2. Shell Programming and Scripting

Need help in using power function in Bash

Hi, I would like to use a power function in Bash in an awk '{ } . e.g pow(2,3)=8 Any suggestion? I try to find online resources but most of them stated by using BC. Please advise. Thanks. (3 Replies)
Discussion started by: ahjiefreak
3 Replies

3. Shell Programming and Scripting

bash search function

I want to have a function with a similar interface: search *.cpp asdf that will search recursively all directories for *.cpp file, containing line 'asdf' inside. I tried this: function search { find . -name "$1" | xargs grep -li $2; } But it doesn't work all the time. For example, if i run it... (3 Replies)
Discussion started by: doze
3 Replies

4. Shell Programming and Scripting

BASH function error

Hey everyone. I am currently testing my first function based BASH script. The ultimate goal is going to be moving logs from point A to point B (or if B is down, to point C). Part of this involves the following function: function testAlive{ ping -c 1 -q $1 } Now when I run ping -c... (1 Reply)
Discussion started by: msarro
1 Replies

5. Shell Programming and Scripting

bash read within function with arguments

I have trouble getting this logic to work #!/bin/bash function assign_var(){ while do read -p "$2 :" $3 done } assign_var '$IPADDRESS' ipaddress IPADDRESS Basicly, i want to make sure that entry is made (i can add more sophisticated checks later), but the idea is to recycle... (11 Replies)
Discussion started by: serverchief
11 Replies

6. Shell Programming and Scripting

Bash function

startvm() { startguest } Is there a way use one line to get this ? actually I want startvm=startguest (5 Replies)
Discussion started by: yanglei_fage
5 Replies

7. UNIX for Dummies Questions & Answers

Bash INKEY$ function...

This is probably common knowledge to the professionals but not so much for amateurs like myself. This is a code snippet for the equivalent of BASIC's... LET char$=INKEY$ As the timeout parameter cannot be less than 1 second then this is the only limitation... It is a single line... (5 Replies)
Discussion started by: wisecracker
5 Replies

8. Shell Programming and Scripting

Bash function, for BSD

I am putting this thread to shell-threads, because it is about how to make a function work properly. I need a hint for declaring a function right, it has been more than a year I did not work that straight with bash. So my aim is to turn off the eth0 (as it would be in linux, and bge0 in bsd ),... (2 Replies)
Discussion started by: 1in10
2 Replies

9. Shell Programming and Scripting

Bash function problem

I am trying to figure out why I am having a "problem" with some functions in a bash script I am running. The reason for air quoting is that the functions are working, they are just not displaying anything to screen when called from another function. Here's an example: function Create_Input {... (6 Replies)
Discussion started by: dagamier
6 Replies

10. UNIX for Beginners Questions & Answers

Bash selection of files with similar name

Hi all, This is my first day on Linux shell!!! So, I am trying to write a script that that will pick up pairs of files with the same name (not the same content) but that are different in one character (one is *R1 the other is *R2)... Something like: look ate the files, whenever they are the... (3 Replies)
Discussion started by: ALou
3 Replies
XPRINTF_COMP(3) 					   BSD Library Functions Manual 					   XPRINTF_COMP(3)

NAME
free_printf_comp, new_printf_comp -- extensible printf compilation SYNOPSIS
#include <printf.h> void free_printf_comp(printf_comp_t pc); printf_comp_t new_printf_comp(printf_domain_t restrict domain, locale_t restrict loc, const char * restrict fmt); DESCRIPTION
To ameliorate some of the slowness caused by the extra overhead in extensible printf (see xprintf(5)), a compile/execute mechanism has been created. The new_printf_comp() function compiles the given format string, along with a printf domain (see xprintf_domain(3)) and an extended locale (see xlocale(3)), and returns a printf_comp_t structure. The domain may not be NULL, but the locale can be NULL, which means to use the current locale, either the per-thread locale if it was set, or else the global locale. Because the printf_comp_t structure records the domain and locale, care should be taken if either of these are changed. Once a printf_comp_t structure is created, it can be passed to one of the extensible printf execution variants, described in xprintf_exec(3), along with the necessary arguments. Creating the printf_comp_t structure needs to be done only once, but it can be passed to extensible printf execution variants any number of times. When the printf_comp_t structure is no longer needed, it should be passed to free_printf_comp() to release internal memory. RETURN VALUES
The new_printf_comp() function returns the new structure, or NULL on error (usually NULL domain or out of memory condition). SEE ALSO
xlocale(3), xprintf_domain(3), xprintf_exec(3), xprintf(5) Darwin Aug 19, 2012 Darwin
All times are GMT -4. The time now is 04:41 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy