I hope this is more clear:
I am trying to use the two files shown below to either remove or rename contents in one of those files. If in combine.txt $5 matches $5 of output.txt and the value in $1 of combine.txt is not "No Match" then that value is substituted for all values in $5 and $1 of output.txt. If however in $1 of combine.txt the value is "No Match", then the row in output.txt with that $5 value in it and the one below it are removed. Thank you .
For example,
"DTE3504500000004" is the value of $5 in combine.txt and that matches row 3 of output.txt $5 , since the value in $1 of combine.txt is "No Match", rows 9 and 10 are removed from output.txt.
"DTE3504500000005" is the value of $5 in combine.txt and that matches row 11 of output.txt $5 , since the value in $1 of combine.txt is not "No Match", rather "PXL-A0000005" that new value is used to replace all occurrences of the old value in output.txt.
Code:
file1.txt
No Match chr1 35696 36106 DTE3504500000004
PXL-A0000005 chr1 69066 69311 DTE3504500000005
Hi
Let say a flat file contains 1000 lines. The cursor is at the 530 line number.
Now I like to delete all the line at one ahot. how it can be done? (2 Replies)
Hello guys, thank God that I found this forum.
I hope that someone can help me because I don't have any idea on how to start it. I know that for some of you this is a very simple task but I'm not as advance on shell scripting like many people out there.
I got this file with a permanent... (10 Replies)
So, this issue is driving me nuts! I was hoping to get a lending hand here...
I have 2 files:
file1.txt contains:
this is example1
this is example2
this is example3
this is example4
this is example5
file2.txt contains:
example3
example5
Basically, I need a script or command to... (4 Replies)
Hi,
I have a file nexus-1234 in a directory. I want to generate a random number and replace the 1234 with it and rename the file.
So nexus-1234 becomes nexus-2863 after running the script.
Any help is appreciated. Thanks in advance. (2 Replies)
Hi
I have 2 files
1.del
----
1,2,3,4,5
1,2,3,4,4
1,1,1,1,2
2.del
----
1,2,3,4,5
1,
1,2,3,4,4
1,1,1,1,2
I need to compare the above two files in unix, as in the output should only tell the difference in contents as I should get only the line
1 ( from 2.del) , rest all lines are... (4 Replies)
Good day all.
Using basic UNIX/Linux tools, how would you delete a line based on a character found in column 1?
For example, if the CITY name contains an 'a' or 'A', delete the line:
New York City; New York
Los Angeles; California
Chicago; Illinois
Houston; Texas
Philadelphia;... (3 Replies)
Hello All,
Can you help me in writing a script for reading the specific position data in a file and if that data found in that file that particular file should be renamed.
Ex: Folder : C:\\test
and Filename : CLSACK_112214.txt,CLSACK_112314.txt,CLSACK_112414.txt
Contents in the file would... (3 Replies)
hello Friend,
In hostgroup file, i have define lots of hostgroups. I need to remove few of them without manually editing file. Need script or syntax.
I want to search particular on hostgroup_members and delete hostgoup defination of it.
for example.
define hostgroup{
hostgroup_name... (8 Replies)
In the below there are two generic .vcf files (genome.S1.vcf and genome.S2.vcf) in a directory. There wont always be two genaric files but I am trying to use bash to rename each of these generic files with specfic text (unique identifier) within in each .vcf. The text will always be different, but... (11 Replies)
Perl::Critic::Policy::InputOutput::ProhibitTwoArgOpen(3)User Contributed Perl DocumentatioPerl::Critic::Policy::InputOutput::ProhibitTwoArgOpen(3)NAME
Perl::Critic::Policy::InputOutput::ProhibitTwoArgOpen - Write "open $fh, q{<}, $filename;" instead of "open $fh, "<$filename";".
AFFILIATION
This Policy is part of the core Perl::Critic distribution.
DESCRIPTION
The three-argument form of "open" (introduced in Perl 5.6) prevents subtle bugs that occur when the filename starts with funny characters
like '>' or '<'. The IO::File module provides a nice object-oriented interface to filehandles, which I think is more elegant anyway.
open( $fh, '>output.txt' ); # not ok
open( $fh, q{>}, 'output.txt' ); # ok
use IO::File;
my $fh = IO::File->new( 'output.txt', q{>} ); # even better!
It's also more explicitly clear to define the input mode of the file, as in the difference between these two:
open( $fh, 'foo.txt' ); # BAD: Reader must think what default mode is
open( $fh, '<', 'foo.txt' ); # GOOD: Reader can see open mode
This policy will not complain if the file explicitly states that it is compatible with a version of perl prior to 5.6 via an include
statement, e.g. by having "require 5.005" in it.
CONFIGURATION
This Policy is not configurable except for the standard options.
NOTES
There are two cases in which you are forced to use the two-argument form of open. When re-opening STDIN, STDOUT, or STDERR, and when doing
a safe pipe open, as described in perlipc.
SEE ALSO
IO::Handle
IO::File
AUTHOR
Jeffrey Ryan Thalhammer <jeff@imaginative-software.com>
COPYRIGHT
Copyright (c) 2005-2011 Imaginative Software Systems. All rights reserved.
This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.16.3 2014-06-09 Perl::Critic::Policy::InputOutput::ProhibitTwoArgOpen(3)
05-11-2015
.