Bash to search file based off user input then create new file
In the below bash a file is downloaded when the program is opened and then that file is searched based on user input and the result is written to a new file.
For example, the bash is opened and the download.txt is downloaded, the user then enters the id (NA04520). The id is used to search download.txt and the line is written to match.txt. The code runs but no output result. Eventually, I will search for specific text in the line that id was found in, but I figured getting the search based of user input was a to work is a good start. Thank you .
Code:
#!/bin/bash
cd 'C:\Users\cmccabe\Desktop\wget'
wget -O getCSV.txt http://xxx.xx.xxx.xxx/data/getCSV.csv
{
printf "\n\n"
printf "What is the id of the NGS patient: "; read id
[ -z "$id" ] && printf "\n No ID supplied. Leaving match function." && sleep 2 && return
[ "$id" = "end" ] && printf "\n Leaving match function." && sleep 2 && return
}
input=$id
while read -r line
do
case $line in
*${id}*)
echo $line " yes" >> match.txt
;;
*)
echo "no"
;;
esac
done
I have a file (status.file) of the form:
valueA 3450
valueB -20
valueC -340
valueD 48
I am tailing a data.file, and need to search and modify a value
in status.file...the tail is:
tail -f data.file | awk '{ print $3, ($NF - $(NF-1)) }'
which will produce lines that look like this:
... (3 Replies)
Hi,
I have two files with the format shown below. I need to read first field(value before comma) from file 1 and search for a record in file 2 that has the same value in the field "KEY=" and write the complete record of file 2 with corresponding field 2 of the first file in to result file.
... (11 Replies)
how to grep a file based on another input file
File1
ashu 1 ninetwo hari
qwer 6 givefour jan
fghj 8 noeight mar
vbmi 7 noput feb
--
---
File2
noput
noeight
---
--
Taking the input of grep as File2, a search need to be made in File1 giving File3 as output: (7 Replies)
Ok, I have a script with a commandline option that allows the user to add a custom function to the script file. I have tried everything in my limited knowledge of sed to get this to work and keep coming up short. I need sed to search for a line starting with a pattern, I've got that part so far,... (0 Replies)
Hello I would like to ask for help with a script to search a directory that contains many log files and based on a users input after being prompted, they enter a date range down to the hour which searches the files that contain that range.
I dont know how to go about this. I am hoping that the... (5 Replies)
Hi All,
I am very new to UNIX and I have tried this for a longtime now and unable to crack it....
There is a file that is continuously updating. I need to search for the string and find the date @ which it updated every day.....
eg:
String is "work started"
The log entry is as below:
... (1 Reply)
Hi,
Below is my requirement
File1:
svasjsdhvassdvasdhhgvasddhvasdhasdjhvasdjsahvasdjvdasjdvvsadjhv
vdjvsdjasvdasdjbasdjbasdjhasbdasjhdbjheasbdasjdsajhbjasbjasbhddjb
svfsdhgvfdshgvfsdhfvsdadhfvsajhvasjdhvsajhdvsadjvhasjhdvjhsadjahs
File2:
sdh
hgv
I need a command such that... (8 Replies)
Hi Gurus,
I am SQL developer and new unix user.
I need to create some file and file content based on information in two files.
I have one file contains basic information below file1 and another exception file file2. the rule is if "zone' and "cd" in file1 exists in file2, then file name is... (13 Replies)
I am trying to create a bash script that will create new function by using the user input. The below will create the necessary files in the correct format, however when it comes to the # create function I am at a loss.
If the name entered was NEWNAME and the genes were GENE1,GENE2 then two files... (0 Replies)
Discussion started by: cmccabe
0 Replies
LEARN ABOUT DEBIAN
rdup-up
RDUP-UP(1) rdup RDUP-UP(1)NAME
rdup-up - update a directory tree with a rdup archive
SYNOPSIS
rdup-up [OPTION]... DIRECTORY
DESCRIPTION
With rdup-up you can update an (possibly) existing directory structure with a rdup archive.
The rdup archive has to be given to rdup-up's standard input.
Username and uids
rdup outputs both the username and uid, the receiving system (which may be a totally different system) checks if the username and uid
match. If the username and uid don't match the (numeric) uid is used on the file. The same holds true for the groupname and gid.
OPTIONS -n Do a dry-run and do not create anything on disk.
-t Create DIRECTORY (ala mkdir -p) if it does not exist.
-s N Strip N path components from a pathname. If the resulting pathname is empty after this operation it is skipped. Be careful however
with the following structure:
/foo
/foo/bar
/foo/bar/bla.txt
/foo/blork/bla.txt
With rdup-up -s2 this will leave:
<empty>
<empty>
/bla.txt
/bla.txt
And the last 'bla.txt' will overwrite the previous one, this will happen without warnings.
-r PATH
This option is related to the -s option, but works different. The string PATH is removed from (the beginning of) each pathname. With
-r /home/backup the pathname /home/backup/bin/mycmd becomes /bin/mycmd. The same could be done with -s 2, but then you need to count
the slashes. Note -s is always performed before -r.
-v Be more verbose and echo the processed files to standard output.
-vv Be even more verbose and echo processed file and the uid and gid information to standard output.
-T Show a table of contents of the rdup stream received (ala tar -tf -). With -T the directory argument is optional. -T unsets any
verbose (-v) options.
-h A short help message.
-V Show the version.
EXIT CODE
rdup-up return a zero exit code on success, otherwise 1 is returned.
AUTHOR
Written by Miek Gieben.
REPORTING BUGS
Report bugs to <miek@miek.nl>.
SEE ALSO
http:/www.miek.nl/projects/rdup/ is the main site of rdup. Also see rdup(1), rdup-tr(1) and rdup-backups(7).
COPYRIGHT
Copyright (C) 2005-2010 Miek Gieben. This is free software. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
Licensed under the GPL version 3. See the file LICENSE in the source distribution of rdup.
1.1.11 13 Dec 2008 RDUP-UP(1)
04-30-2015
.