I have a output of a command like this.
the command is : bdf|sed '/^e/d'|awk '{print$2/1048576}'
output :
0
0.515625
0.481979
2
2
2
7.8125
4
2
0.488281
7.8125
3.90625
4
1.95312
1
0.488281 (4 Replies)
Hello,
I have a shell script that is used as follows:
./script -s <Oracle_server_name>
the script returns several lines in this format:
parameter name required value Current Value comments
--------------- ------------- -------------- ---------
My objective now is to compare 2... (1 Reply)
Hello,
I have two strings those are outputs of two echo commands:
$ logslist=`ls -1rt vp_lb_indv*.log | tail -1`; tail -7 $logslist | head -1
ERROR: Errors printed on pages 5,22.
$ logslist=`ls -1rt vp_lb_indv*.log | tail -1`; errpages=`tail -7 $logslist | head -1`; echo... (3 Replies)
Hi,
I am trying to sort and display the below(like) input using awk command:
Input:
------
0;A
4;A
5;A
33;A
45;A
0;B
4;B
5;B
33;B
45;B
Output (desired): (5 Replies)
hi friends,
The code:
i=1
while
do
filename=`/usr/bin/ls -l| awk '{ print $9}'`
echo $filename>>summary.csv
#Gives the name of the file stored at column 9
count=`wc -l $filename | awk '{print $1}'`
echo $count>>summary.csv
#Gives just the count of lines of file "filename"
i=`expr... (1 Reply)
Disclaimer: OP is 100% Awk beginner.
I use this code on ASCII files I need to report against.
awk 'BEGIN {
tokens = 0
tokens = 0
tokens = 0
}
{ for (token in tokens)
{ if ($1 == token){print $0; tokens++;}}}
END {for (token in tokens){
if( tokens ==... (1 Reply)
In shell script i have two variables with value
debit_sal="DOG,HIU,JIU,GYT,PPI,KIU,HUY........."
debit_req='HIU, JIU, HUY, GTR, KOI, ............"
i stored this two in two array
arr=$(echo $debit_sal| tr "," "\n");
arr1=$(echo $debit_req| tr ", " "\n"); #(note second arry has comma with... (5 Replies)
NEVERMIND.... "$TIME" did the trick... stupid me. :o
Hi,
I know that this must be something pretty dumb but I cant figure it out myself.
I have this:
#!/bin/bash
TIME="Time: 20120611"
FILE=file.log
grep $TIME $FILE
And I get the following output:
file.log:Time: 20120611... (2 Replies)
I run cygwin on windows 7, and have been using the windows command line. I've been trying to gunzip some previously compressed large sequence output files in .txt.gz format. This worked for about the first 10 files and then for the rest of them the file (as viewed using the 'head' command) is... (1 Reply)
I hope I can explain this correctly. I am using Bash-4.2 for my shell.
I have a group of file names held in an array. I want to compare the names in this array against the names of files currently present in a directory. If the file does not exist in the directory, that is not a problem.... (5 Replies)
Discussion started by: BudMan
5 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)