1. SuSE

Sir, I using the following commands in a file (part of a bigger script): #!/bin/bash cd /opt/oracle/bin ls -lt | tail -1 | awk '{print $6}' >> /tmp/ramb.out If I run this from the command prompt the result is: 2007-05-16 if I run it as a cron job then... (5 Replies)

2. UNIX for Dummies Questions & Answers

Hi, I am REALLY a newbie of Unix: hope this question is not too odd. Here is my problem: I have to submit jobs to a remote platform (an IBM BCX/5120). To submit I have tobsub < filename.jcf and the .jcf file has usually the following content: #!/bin/bash #BSUB <commands of the bsub>... (1 Reply)

3. Shell Programming and Scripting

Hi everyone, when executing this command in unix: echo "WM7 Fatal Alerts:", $(cat query1.txt) > a.csvIt works fine, but running this command in a shell script gives an error saying that there's a syntax error. here is content of my script: tdbsrvr$ vi hc.sh "hc.sh" 22 lines, 509... (4 Replies)

4. Shell Programming and Scripting

Hi! I am currently using the bsub command to submit jobs to a cluster and I need to specify the name of the node to which i want the job sent. What do I add to my .pbs script to specify this? Cheers (0 Replies)

5. Shell Programming and Scripting

Hi There! I'm writing this LSF script to make it easier to send jobs to a cluster when varying certain parameters. At one point I'd like to do something like: set NPROC = 10 and later on call BSUB using something like: #BSUB -n $NPROC unfortunately for me, this throws an error: ... (4 Replies)

6. UNIX for Dummies Questions & Answers

"bsub -o /dev/null -P something -q normal -a optimize -n 1 -R \"rusage\ span\\" -J GUISETUP_${PID} \"dc_shell-t -f .dc_script_$job_index.tcl -output_log_file .dc_shell_$job_index.log \"" Can anybody please tell me the qsub equivalent for this command? ---------- Post updated at 06:48 AM... (0 Replies)

7. UNIX for Dummies Questions & Answers

HI Guys, I hope you are well. I am trying to write a script that gets executed every time i open a shell (cshell). I have two questions about that 1) I need to enter these commands $ echo $DISPLAY $ setenv $DISPLAY output_of_echo_$display_command How can i write a... (2 Replies)

8. UNIX for Dummies Questions & Answers

I'm trying to run some computations on a cluster and have found that a bsub array is what I need.. So I tried running a simple example I found bsub -J "myArray" echo "Job \$LSB_JOBINDEX" This should create 10 jobs that output "Job 1" "Job 2" .. etc. But when I run this from afs space I get... (1 Reply)

9. Shell Programming and Scripting

The red text at the bottom represents the three lines I want to address. I'm dynamically creating a bsub with a perl script and would like to create the fasta_16S variable in a single line....not three. I'm having difficulty in getting the syntax correct. Obviously, there is some confusion... (3 Replies)

10. Shell Programming and Scripting

Hello, When I'm trying to send bsub job using script that executes fine in command line, I get nothing. I do this for testing purposes, and the script scr_test is just one line: pwd > outfile So when I'm executing it in command line: $ ./scr_test it works fine producing the outfile with... (2 Replies)