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Full Discussion: Perl command in bash
Top Forums Shell Programming and Scripting Perl command in bash Post 302939914 by cmccabe on Monday 30th of March 2015 10:11:28 PM
Old 03-30-2015
"${id}.txt.hg19_multianno.txt" the green highlight will have S1 - AP1 as row headers. It will also have data in those columns (in this case 87)... A1 - R1 (headers only) and AQ1-AX1 (headers only). No data is needed for those columns (only the headers). I have a SQL import that is expecting all those columns in one file.

Code:
Index Chromosome ... Amino Acid Change Chr Start ... clinvarsubmit clinvarreference HP SPLICE ... Sanger References

So, the text in bold is added to the "${id}.txt.hg19_multianno.txt" and a new file with the combined is saved in the path. I hope this helps and apologize for the confusion. Thank you for all your help Smilie.
 

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OPENSSL_PKCS7_ENCRYPT(3)						 1						  OPENSSL_PKCS7_ENCRYPT(3)

openssl_pkcs7_encrypt - Encrypt an S/MIME message

SYNOPSIS
bool openssl_pkcs7_encrypt (string $infile, string $outfile, mixed $recipcerts, array $headers, [int $flags], [int $cipherid = OPENSSL_CIPHER_RC2_40]) DESCRIPTION
openssl_pkcs7_encrypt(3) takes the contents of the file named $infile and encrypts them using an RC2 40-bit cipher so that they can only be read by the intended recipients specified by $recipcerts. PARAMETERS
o $infile - o $outfile - o $recipcerts - Either a lone X.509 certificate, or an array of X.509 certificates. o $headers -$headers is an array of headers that will be prepended to the data after it has been encrypted. $headers can be either an asso- ciative array keyed by header name, or an indexed array, where each element contains a single header line. o $flags -$flags can be used to specify options that affect the encoding process - see PKCS7 constants. o $cipherid - One of cipher constants. RETURN VALUES
Returns TRUE on success or FALSE on failure. EXAMPLES
Example #1 openssl_pkcs7_encrypt(3) example <?php // the message you want to encrypt and send to your secret agent // in the field, known as nighthawk. You have his certificate // in the file nighthawk.pem $data = <<<EOD Nighthawk, Top secret, for your eyes only! The enemy is closing in! Meet me at the cafe at 8.30am to collect your forged passport! HQ EOD; // load key $key = file_get_contents("nighthawk.pem"); // save message to file $fp = fopen("msg.txt", "w"); fwrite($fp, $data); fclose($fp); // encrypt it if (openssl_pkcs7_encrypt("msg.txt", "enc.txt", $key, array("To" => "nighthawk@example.com", // keyed syntax "From: HQ <hq@example.com>", // indexed syntax "Subject" => "Eyes only"))) { // message encrypted - send it! exec(ini_get("sendmail_path") . " < enc.txt"); } ?> PHP Documentation Group OPENSSL_PKCS7_ENCRYPT(3)
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