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Full Discussion: Perl to parse
Top Forums Shell Programming and Scripting Perl to parse Post 302939329 by durden_tyler on Tuesday 24th of March 2015 05:33:23 PM
Old 03-24-2015
Quote:
Originally Posted by cmccabe
...
Code:
...
DEL parse rules (column 3 after the headr row is skipped):
1. 4 zeros after the NC_  (not always the case) and the digits before the .
2. g. ###   g.### (all digits)
3. letter after "del" (C) 
4.  hyphen "-" used in this spot   
      
Desired Output from parse:  13     20763438     20763438     C     G

(a)
Rule # 4 - there is no hyphen ("-") either in your attached file or in your output. So what exactly is that rule? Can you post input data on which that rule can be applied?

(b)
Desired output:
The token "20763438" is not seen in the last line of your attached file (the one where the "DEL" parse rule is to be applied apparently), but it is seen in your desired output.

The characters "C" and "G" are not seen together in any token in the last line of your attached file, but are seen together in the desired output.

Can you post the appropriate input data and its corresponding desired output that is obtained after applying all the rules?
 

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