Login or Register to Ask a Question and Join Our Community

Sponsored Content
Full Discussion: awk to parse file and display result based on text
Top Forums Shell Programming and Scripting awk to parse file and display result based on text Post 302938322 by Walter Misar on Saturday 14th of March 2015 10:42:44 AM
Old 03-14-2015
Something like the following should work then:

Code:
awk 'NR>1 { if ($2 ~ /^\(/ ) {$1=""; print "Found error: ", $0} else { sub(/.*:/, "", $1); print "No error: " $1 }}' C:/Users/cmccabe/Desktop/annovar/${id}_name.txt

 

10 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

display the result of wc -l with words before and after the result

hello showrev -p | wc -l returns: 381 What to do in case I want to have this output: number of lines returned by showrev -p is: 381 thx (3 Replies)
Discussion started by: melanie_pfefer
3 Replies

2. Shell Programming and Scripting

Parse a file to display lines containing a word

Hi! I'm trying to create a shell script to parse a file which might have multiple lines matching a pattern (i.e. containing some word). I need to return all lines matching the pattern, but stripping the contents of that line until the pattern is matched For example, if my input file was ... (4 Replies)
Discussion started by: orno
4 Replies

3. Shell Programming and Scripting

sed or awk to parse this text

I am just beginning with sed and awk and understand that they are "per" line input. That is, they operate on each line individually, and output based on rules, etc. But I have multi-line text blocks that looks as follows, and wish to ONLY extract the text between the first hyphen (-) and the... (13 Replies)
Discussion started by: bulgin
13 Replies

4. Shell Programming and Scripting

Processing result file based on a minimal value

After the great awk solution to my last problem (that saved me days of work) I thought I would try again. I now have a result file that consists of two identifier columns and then columns of data for each sample, with tabs as delimiters (note the sample number can vary depending on the... (8 Replies)
Discussion started by: fozrun
8 Replies

5. Shell Programming and Scripting

AWK Command parse a file based on string.

AWK Command parse a file based on string. I am trying to write a shell script to parse a file based on a string and move the content of the file to another file. Here is scenario. File content below Mime-Version: 1.0 Content-Type: multipart/mixed; ... (2 Replies)
Discussion started by: aakishore
2 Replies

6. Shell Programming and Scripting

Different cmd to execute and based on some pattern parse it and then store result in xlx format

Hi I have a different requirement, I need to run some application on my device from a file app_name.txt one by one which is like this: /usr/apps/email /usr/apps/message /usr/apps/settings after each app while it is running I need to execute again one cmd like ps -ef |grep... (2 Replies)
Discussion started by: Sanjeev Roy
2 Replies

7. Shell Programming and Scripting

awk Parse And Create Multiple Files Based on Field Value

Hello: I am working parsing a large input file which will be broken down into multiples based on the second field in the file, in this case: STORE. The idea is to create each file with the corresponding store number, for example: Report_$STORENUM_$DATETIMESTAMP , and obtaining the... (7 Replies)
Discussion started by: ec012
7 Replies

8. Shell Programming and Scripting

awk parse result that match data from file

i run command that return this result,example : gigabitethernet2/2/4:NotPresent, gigabitethernet2/1/17:UP, gigabitethernet2/1/10:UP, gigabitethernet2/1/5:UP, gigabitethernet2/1/9:UP, gigabitethernet2/1/36:DOWN, gigabitethernet2/1/33:DOWN, gigabitethernet2/1/8:UP,... (19 Replies)
Discussion started by: wanttolearn1
19 Replies

9. Shell Programming and Scripting

awk to skip lines find text and add text based on number

I am trying to use awk skip each line with a ## or # and check each line after for STB= and if that value in greater than or = to 0.8, then at the end of line the text "STRAND BIAS" is written in else "GOOD". So in the file of 4 entries attached. awk tried: awk NR > "##"' "#" -F"STB="... (6 Replies)
Discussion started by: cmccabe
6 Replies

10. Programming

How to parse .nessus file to get result in human readable format?

Scripting Language: bash shell script, python I want to parse .nessus file in human readable format. If any one have any ideas please help me. (2 Replies)
Discussion started by: sk151993
2 Replies

LEARN ABOUT MOJAVE

locale::codes::langfam

Locale::Codes::LangFam(3pm)				 Perl Programmers Reference Guide			       Locale::Codes::LangFam(3pm)

NAME

       Locale::Codes::LangFam - standard codes for language extension identification

SYNOPSIS

	  use Locale::Codes::LangFam;

	  $lext = code2langfam('apa');		       # $lext gets 'Apache languages'
	  $code = langfam2code('Apache languages');    # $code gets 'apa'

	  @codes   = all_langfam_codes();
	  @names   = all_langfam_names();

DESCRIPTION

       The "Locale::Codes::LangFam" module provides access to standard codes used for identifying language families, such as those as defined in
       ISO 639-5.

       Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639-5
       language family codes will be used.

SUPPORTED CODE SETS

       There are several different code sets you can use for identifying language families. A code set may be specified using either a name, or a
       constant that is automatically exported by this module.

       For example, the two are equivalent:

	  $lext = code2langfam('apa','alpha');
	  $lext = code2langfam('apa',LOCALE_LANGFAM_ALPHA);

       The codesets currently supported are:

       alpha
	   This is the set of three-letter (lowercase) codes from ISO 639-5 such as 'apa' for Apache languages.

	   This is the default code set.

ROUTINES

       code2langfam ( CODE [,CODESET] )
       langfam2code ( NAME [,CODESET] )
       langfam_code2code ( CODE ,CODESET ,CODESET2 )
       all_langfam_codes ( [CODESET] )
       all_langfam_names ( [CODESET] )
       Locale::Codes::LangFam::rename_langfam  ( CODE ,NEW_NAME [,CODESET] )
       Locale::Codes::LangFam::add_langfam  ( CODE ,NAME [,CODESET] )
       Locale::Codes::LangFam::delete_langfam  ( CODE [,CODESET] )
       Locale::Codes::LangFam::add_langfam_alias  ( NAME ,NEW_NAME )
       Locale::Codes::LangFam::delete_langfam_alias  ( NAME )
       Locale::Codes::LangFam::rename_langfam_code  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangFam::add_langfam_code_alias  ( CODE ,NEW_CODE [,CODESET] )
       Locale::Codes::LangFam::delete_langfam_code_alias  ( CODE [,CODESET] )
	   These routines are all documented in the Locale::Codes::API man page.

SEE ALSO

       Locale::Codes
	   The Locale-Codes distribution.

       Locale::Codes::API
	   The list of functions supported by this module.

       http://www.loc.gov/standards/iso639-5/id.php
	   ISO 639-5 .

AUTHOR

       See Locale::Codes for full author history.

       Currently maintained by Sullivan Beck (sbeck@cpan.org).

COPYRIGHT

	  Copyright (c) 2011-2013 Sullivan Beck

       This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

perl v5.18.2							    2013-11-04					       Locale::Codes::LangFam(3pm)
All times are GMT -4. The time now is 05:28 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy