Thank you very much. I attached the combined.txt but forgot that $5 needs to be copied to $8 and the blank row in between the two lines removed. The combined.txt really only needs to loo like the below, but I'm not sure how to do this. Basically, I am going to importing the sheet into a SQL database and trying to format the data accordinly, the values in the sheet are combined (..... ref and .....antiref) and the chromosome is matched. Thank you very much .
Hi,
I am having file which contains around 15 columns, i need to fetch column 3,12,14 based on the condition that column 3 starts with 40464
this is the sample data
how to achieve that (3 Replies)
I’m trying to modify someone perl script to fix a bug. The piece of code checks that the zone name you want to add is unique. However, when the code runs, it finds a partial match using grep, and decides it already exists, so the “create” command exits.
$cstatus = `${ZADM} list -vic | grep... (3 Replies)
Hi
I have a log file which has outputs like the one below
conn=24,196 op=1 RESULT err=0 tag=0 nentries=9 etime=3,712 dbtime=0 mem=486,183,328/2,147,483,648
Now most of the time I am only interested in the time ( the first column) and a column that begins with etime i.e... (8 Replies)
Hi, I was trying to figure this out but failed so I hope someone here can help me, thank you in advance.
I have two files.
file1: aa M
bb N
cc O
dd P
ee Q file2: aa A_87_P254063
cc A_87_P016532
bb A_87_P104793
dd A_87_P055331
ee A_87_P059706
aa A_87_P071636
ee A_87_P028302... (2 Replies)
Hi I have a question and hope I can get answer here. Thank you in advance.
I have two files:
file1:
aa X
bb Y
cc Z
file2:
cc A
bb B
dd C
aa D
bb E
If the 1st column match in both file1 and file2, the 2nd column in file2 will be replaced by the 2nd column in file1. If there is no... (2 Replies)
Trying to combine strings that are a partial match to another in $1 (usually below it). If a match is found than the $2 value is added to the $2 value of the match and the $3 value is added to the $3 value of the match. I am not sure how to do this and need some expert help. Thank you :).
file
... (2 Replies)
Trying to get the unique count of the below input, but if the text in beginning of $5 is a partial match to another line in the file then it is not unique.
awk
awk '!seen++ {n++} END {print n}' input
7 input
chr1 159174749 159174770 chr1:159174749-159174770 ACKR1
chr1 ... (2 Replies)
Hi, I have a tab delimited text file like this one. I need to do a partial match of a particular cell and then replace matches with an empty cell. So here is a sample:
Smith FordMustang ChevroletCamaro
Miller FordFiesta
Jones KiaSorrento
Davis ChevroletCamaro
Johnson ToyotaHighlander
I... (4 Replies)
I am trying to create a cronjob that will run on startup that will look at a list.txt file to see if there is a later version of a database using database.txt as the source. The matching lines are written to output.
$1 in database.txt will be in list.txt as a partial match. $2 of database.txt... (2 Replies)
In the below I am trying to rename the contents within each data subfolder in a specific run, based on a partial match of the IonCode_0000_ in each file in the data subdirectory to $1 in f1. There will be multiple runs in f1 but each run in $uniq is unique and will be found in f1 and the rename... (27 Replies)