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Full Discussion: Array inside sed
Top Forums UNIX for Dummies Questions & Answers Array inside sed Post 302933329 by saleheen on Thursday 29th of January 2015 12:06:39 PM
Old 01-29-2015
Array inside sed

Hi guys

Let me at first describe the whole thing that I'm trying to do. Lets say I have 100 files like the following one.
HTML Code:
Ow            1230   16.000000   -0.834000   16.083957                  
     1.751652398        -17.20094528        -4.450623277                
Hw            1231    1.000000    0.417000   14.341378                  
     2.128451025        -16.83399008        -5.250372494                
Hw            1232    1.000000    0.417000   16.844104                  
    0.9093140466        -16.75614395        -4.356548788                
Ow            1233   16.000000   -0.834000   20.225603                  
    -2.889503614        -23.61890070         10.03599967                
Hw            1234    1.000000    0.417000   20.855176                  
    -2.102487366        -23.08165809         10.12659865                
Hw            1235    1.000000    0.417000   20.448925                  
    -2.604411345         24.18827587         10.26811687                
Ow            1236   16.000000   -0.834000    9.718498                  
    -18.13116183         15.29853776        -10.10585481                
Hw            1237    1.000000    0.417000    9.855829                  
    -18.86525637         14.71715826        -10.30418717                
Hw            1238    1.000000    0.417000    9.294911                  
    -17.66286350         15.38507405        -10.93618054                
Ow            1239   16.000000   -0.834000   10.477756                  
     11.91804137        -21.91087964        -11.56566494
I want to merge all the 100 files. The second field of the 1st,3rd..so on lines shows the atom number i.e 1230,1231. All the files are numbered from 1230..1239. So for the 1st file this numbers are ok, for the second file numbering should start from 1240,1241..and this should go on all the way through the last file. I did merge the files through a loop, The way I was trying to get those atom numbers in an array, replace those array elements with a counter. My thinking was this-

Code:
 myarr=($(awk 'NR % 2 ==1' TestMe | awk '{print $2}'))
echo ${myarr[@]} 
counter=1230; 
for i in "${myarr[@]}" 
do sed "s/$i/$j/g" TestMe;
counter=$(($counter+1)); 
done

I just don't know how to replace array elements in a sed command. Or is it the right way to loop through array elements. And whenever I tried to use that piece of code it said-
Code:
-bash: syntax error near unexpected token `counter=$(($counter+1))'

Thanks a lot!

Last edited by saleheen; 01-29-2015 at 01:56 PM.. Reason: mistake in code
 

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HIGHLIGHT_STRING(3)							 1						       HIGHLIGHT_STRING(3)

highlight_string - Syntax highlighting of a string

SYNOPSIS
mixed highlight_string (string $str, [bool $return = false]) DESCRIPTION
Outputs or returns html markup for a syntax highlighted version of the given PHP code using the colors defined in the built-in syntax highlighter for PHP. PARAMETERS
o $str - The PHP code to be highlighted. This should include the opening tag. o $return - Set this parameter to TRUE to make this function return the highlighted code. RETURN VALUES
If $return is set to TRUE, returns the highlighted code as a string instead of printing it out. Otherwise, it will return TRUE on success, FALSE on failure. EXAMPLES
Example #1 highlight_string(3) example <?php highlight_string('<?php phpinfo(); ?>'); ?> The above example will output (in PHP 4): <code><font color="#000000"> <font color="#0000BB">&lt;?php phpinfo</font><font color="#007700">(); </font><font color="#0000BB">?&gt;</font> </font> </code> The above example will output (in PHP 5): <code><span style="color: #000000"> <span style="color: #0000BB">&lt;?php phpinfo</span><span style="color: #007700">(); </span><span style="color: #0000BB">?&gt;</span> </span> </code> NOTES
Note When the $return parameter is used, this function uses internal output buffering so it cannot be used inside an ob_start(3) callback function. The HTML markup generated is subject to change. SEE ALSO
highlight_file(3), Highlighting INI directives. PHP Documentation Group HIGHLIGHT_STRING(3)
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