That may account for the actual output you showed; make sure there's no DOS <CR> line terminators in your data file.
Quote:
I get error while using if statement also.
I don't think so if using if correctly.
Quote:
...Commented portion of the script below throws syntax error.
And I think rightly, for syntactical as well as logical/semantical reasons:
- ... ? ... : ... is the conditional assignment operator. You can't use it for flow control. As Scrutinizer said, use if ... else ...
- ( ... ) can't be used in flow control; use { ... }
- /^REF\*F8 can't work as desired here
a) syntactically: a pattern cannot be used inside an action. Use if (/.../) and it will fly
b) logically: it's working on a line that starts with CLM, so ^REF will never be true. When a line with ^REF is encountered, it will not enter this action.
---------- Post updated at 17:29 ---------- Previous update was at 17:02 ----------
Tried to prettify your script. First version delivered the same output from your sample input as did your script. Some modifications of both script and data file delivered the desired output (or pretty close, at least):
Had to make some assumptions (e.g. CLM record appearing before REF F8 record) and had to set the FREQ to 7 in your sample data, but you get the gist (I hope).
Hello, i'm workig with a file with structural information about biological macromolecules (proteins etc).
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@<TRIPOS>MOLECULE
blah 1
blah 2
blah 3
@<TRIPOS>MOLECULE
foo 1
foo 2
foo 3
@<TRIPOS>MOLECULE
mmm 1
mmm 2
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The stanza structure
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