01-15-2015
You need to reformat that code - I'm seeing it all as one line.
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LEARN ABOUT DEBIAN
bp_mutate
BP_MUTATE(1p) User Contributed Perl Documentation BP_MUTATE(1p)
NAME
mutate.pl - randomly mutagenize a single protein or DNA sequence
SYNOPSIS
./mutate.pl -p 25 -i test.fa -n 5 -f swiss -o muts.swiss
#or
./mutate.pl --percent=25 --input=test.fa --number=5 -output=x.fa
DESCRIPTION
Randomly mutagenize a single protein or DNA sequence one or more times. Specify percentage mutated and number of resulting mutant
sequences. Print mutagenized sequences to STDOUT or write to an output file.
-h|--help Help
-p|--percent Percent mutagenized
-n|--number Number of mutant sequences created
-o|--output Output file (optional)
-f|--format Output format (default: fasta)
-i|--input Input file
FEEDBACK
User feedback is an integral part of the evolution of this and other Bioperl scripts. Send your comments and suggestions to the Bioperl
mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR
Brian Osborne, bosborne at alum.mit.edu
perl v5.14.2 2012-03-02 BP_MUTATE(1p)