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Top Forums UNIX for Dummies Questions & Answers Delete specific strings in a file Post 302931129 by pilnet101 on Saturday 10th of January 2015 09:26:16 PM
Old 01-10-2015
You can try:

Code:
awk 'NF&&!/^C/{print ">"$0}' ORS="" RS=">"

This User Gave Thanks to pilnet101 For This Post:
 

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fastautils(1)					     FASTA format file manipulation utilities					     fastautils(1)

NAME
fastautils - FASTA format file manipulation utilities SYNOPSIS
fastachecksum [ options ] <input file> fastaclean fastaclip fastacomposition fastadiff fastaexplode fastafetch fastahardmask fastaindex fastalength fastanrdb fastaoverlap fastareformat fastaremove fastarevcomp fastasoftmask fastasort fastasplit fastasubseq fastatranslate fastavalidcds DESCRIPTION
These are utilities for the manipulation of FASTA format sequence databases which are distributed with the exonerate sequence alignment program. ENVIRONMENT
Not documented yet. EXAMPLES
fastalength sequence.fasta blah blah VERSION
This documentation accompanies version 2.2.0 of the exonerate package. AUTHOR
Guy St.C. Slater. <guy@ebi.ac.uk>. See the AUTHORS file accompanying the source code for a list of contributors. AVAILABILITY
This source code for the exonerate package is available under the terms of the GNU general public licence. Please see the file COPYING which was distrubuted with this package, or http://www.gnu.org/licenses/gpl.txt for details. This package has been developed as part of the ensembl project. Please see http://www.ensembl.org/ for more information. SEE ALSO
exonerate(1),e-PCR fastautils March 2003 fastautils(1)
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