Sponsored Content
Top Forums Shell Programming and Scripting Range Comparison Of Column Value in File1 with Other File Post 302928203 by siramitsharma on Wednesday 10th of December 2014 04:31:36 AM
Old 12-10-2014
Hi Rudi,
How do I put the residual non matching ones in KOL?

Since I have more than 100 files for doing this operation so please suggest if this way will be efficient or not?

---------- Post updated at 03:01 PM ---------- Previous update was at 10:37 AM ----------

Hi,
I have tried added the range for handling KOL output using it range mentioned in file3 & hence changing the code as below. Please help

File3:
Code:
 KOL|1350000000|1350851179
KOL|1350851180|1350911179
KOL|1350911180|1350999999
KOL|1365000000|1365765346
KOL|1365765347|1365765746
KOL|1365765747|1365999999
KOL|1373000000|1373999999
KOL|1491000000|1491999999
KOL|1959000000|1959918057
KOL|1959923058|1959999999

Code:
 awk 'FNR==1 {++filecounter}
 filecounter==1 {KOLMIN[NR]=$2;KOLMAX[NR]=$3;next}
filecounter==2 {ROWBMIN[NR]=$2;ROWBMAX[NR]=$3;next}
{
for (i in MIN)
{        if (substr($17,6,length($17)-5) >= KOLMIN[i] && substr($17,6,length($17)-5) <= KOLMAX[i])
              {  print $0"|"FILENAME   >>"koloutfile" }
else if (substr($17,6,length($17)-5) >= ROWBMIN[i] && substr($17,6,length($17)-5) <= ROWBMAX[i])
{print $0"|"FILENAME   >>"rowboutfile"}
 }
}
' FS="|" file3 file2 file1

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Looking for AWK Solution for column comparison in a single file

- I am looking for different kind of awk solution which I don't think is mentioned before in these forums. Number of rows in the file are fixed Their are two columns in file1.txt 1 1 2 2 3 3 4 4 5 5 6 6 7 7 8 8 9 9 10 10 I am looking for 3... (1 Reply)
Discussion started by: softwarekids23
1 Replies

2. Shell Programming and Scripting

Match column 3 in file1 to column 1 in file 2 and replace with column 2 from file2

Match column 3 in file1 to column 1 in file 2 and replace with column 2 from file2 file 1 sample SNDK 80004C101 AT XLNX 983919101 BB NETL 64118B100 BS AMD 007903107 CC KLAC 482480100 DC TER 880770102 KATS ATHR 04743P108 KATS... (7 Replies)
Discussion started by: rydz00
7 Replies

3. Shell Programming and Scripting

column value comparison in a file

Hi, Can any one help with my below requirement. i need to compare each line by line and in each line i have to compare some columns values with previous line column values in perl script. Can any one help me........! its very urgent. Thanks (3 Replies)
Discussion started by: jam_prasanna
3 Replies

4. Shell Programming and Scripting

awk column comparison big file

Hi all, I would like to compare a column in one file to a column in another file and when there is a match it prints the first column and the corresponding second column. Example File1 ABA ABC ABE ABF File 2 ABA 123 ABB 124 ABD 125 ABC 126 So what I would like printed to a... (6 Replies)
Discussion started by: pcg
6 Replies

5. Shell Programming and Scripting

Match one column of file1 with that of file2

Hi, I have file1 like this aaa ggg ddd vvv eeeand file2 aaa 2 aaa 443 xxx 76 aaa 34 ggg 33 wee 99 ggg 33 ddd 1 ddd 10 ddd 98 sds 23 (4 Replies)
Discussion started by: polsum
4 Replies

6. UNIX for Dummies Questions & Answers

if matching strings in file1 and file2, add column from file1 to file2

I have very limited coding skills but I'm wondering if someone could help me with this. There are many threads about matching strings in two files, but I have no idea how to add a column from one file to another based on a matching string. I'm looking to match column1 in file1 to the number... (3 Replies)
Discussion started by: pathunkathunk
3 Replies

7. UNIX for Dummies Questions & Answers

Extracting rows from a text file if the value of a column falls between a certain range

Hi, I have a file that looks like the following: 10 100080417 rs7915867 ILMN_1343295 12 6243093 7747537 10 100190264 rs2296431 ILMN_1343295 12 6643093 6647537 10 100719451 SNP94374 ILMN_1343295 12 6688093 7599537 ... (1 Reply)
Discussion started by: evelibertine
1 Replies

8. Shell Programming and Scripting

Replace specific column range in a non-delimited file with a string!

Hi All, I will need an help with respect to replacing a range of columns on a non-delimited file using a particular string pattern. Say file input is MYNUMBERD000000-BAN CHUE INSNTS ** N+ MYAREDSDD000000+BAN CHUE INSNTS ** N+ MYDERFFFSD00000-GIR PENT - ACH ** ... (5 Replies)
Discussion started by: navojit dutta
5 Replies

9. Shell Programming and Scripting

awk to search field2 in file2 using range of fields file1 and using match to another field in file1

I am trying to use awk to find all the $2 values in file2 which is ~30MB and tab-delimited, that are between $2 and $3 in file1 which is ~2GB and tab-delimited. I have just found out that I need to use $1 and $2 and $3 from file1 and $1 and $2of file2 must match $1 of file1 and be in the range... (6 Replies)
Discussion started by: cmccabe
6 Replies

10. UNIX for Beginners Questions & Answers

How to sum value of a column by range defined in another file awk?

I have two files, file1.table is the count table, and the other is the range condition file2.range. file1.table chr start end count N1 0 48 1 N1 48 181 2 N1 181 193 0 N1 193 326 2 N1 326 457 0 N1 457 471 1 N1 471 590 2 N1 590 604 1 N1 604 752 1 N1 752 875 1 file2.range... (12 Replies)
Discussion started by: yifangt
12 Replies
Perl::Critic::Policy::BuiltinFunctions::ProhibitLvalueSuUser(Contributed Perl DocPerl::Critic::Policy::BuiltinFunctions::ProhibitLvalueSubstr(3pm)

NAME
Perl::Critic::Policy::BuiltinFunctions::ProhibitLvalueSubstr - Use 4-argument "substr" instead of writing "substr($foo, 2, 6) = $bar". AFFILIATION
This Policy is part of the core Perl::Critic distribution. DESCRIPTION
Conway discourages the use of "substr()" as an lvalue, instead recommending that the 4-argument version of "substr()" be used instead. substr($something, 1, 2) = $newvalue; # not ok substr($something, 1, 2, $newvalue); # ok The four-argument form of "substr()" was introduced in Perl 5.005. This policy does not report violations on code which explicitly specifies an earlier version of Perl (e.g. "use 5.004;"). CONFIGURATION
This Policy is not configurable except for the standard options. SEE ALSO
"substr" in perlfunc (or "perldoc -f substr"). "4th argument to substr" in perl5005delta AUTHOR
Graham TerMarsch <graham@howlingfrog.com> COPYRIGHT
Copyright (c) 2005-2011 Graham TerMarsch. All rights reserved. This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself. perl v5.14.2 2012-06-07 Perl::Critic::Policy::BuiltinFunctions::ProhibitLvalueSubstr(3pm)
All times are GMT -4. The time now is 03:26 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy