10-30-2014
Hi,
Thanks for the replies. Unfortunately it doesn't seem to work
In the case of Singh and Akshay, the output is just like file 1 and with Don's code, the output is >--[cov=]
Does it matter if file is a tsv file and not separated by space?
Thanks
9 More Discussions You Might Find Interesting
1. Linux
say i have these many file in a directory named exam.
1)/exam/newfolder/link.txt.
2)/exam/newfolder1/
and i create a tar say exam.tar
well the problem is,
when i read the tar file i dont find any metadata about the directories,as you cannot create a tar containig empty directories.
on the... (2 Replies)
Discussion started by: Tanvirk
2 Replies
2. Shell Programming and Scripting
Input
#HAC0253
EFVHIJHIJEFVTHIJOPKOPKTEFVEFVEFVOPKHIJOPKOPKHIJTTEFVEFVTEFV
#BASFS12
EFVEFVHIJEFVEFVTOPKEFVOPKTHIJTTHIJOPK
#ACG5115
TEFVEFVOIJEFVHIJHIJOPKOPKHIJHIJTTEFVEFVOPKTTEFVEFVOPKHIJOPKOPKOPK
#ECG5114
IJTOPKHIJEFVOEFVEFVOPKTTEFVEFVOPKHIJOPKOPKOPK
.
.
Output (5 Replies)
Discussion started by: patrick87
5 Replies
3. UNIX for Dummies Questions & Answers
Friends,
I need help with the following in UNIX.
Merge all csv files in one folder considering only 1 header row and ignoring header of all other files.
FYI - All files are in same format and contains same headers.
Thank you (4 Replies)
Discussion started by: Shiny_Roy
4 Replies
4. Shell Programming and Scripting
Hi,
I have an input like this
1 2 3 4
2 3 4 5
4 5 6 7
I would like to count the no. of columns and print a header with a prefix "Col".
I would also like to count the no. of rows and print as first column with each line number with a prefix "Row"
So, my output would be
... (2 Replies)
Discussion started by: jacobs.smith
2 Replies
5. Shell Programming and Scripting
Hello There...
I have a sample input file ..
number:department:amount
125:Market:125.23
126:Hardware store:434.95
127:Video store:7.45
128:Book store:14.32
129:Gasolline:16.10
I will be doing some manipulations on all the records except the header, but the header should always be... (2 Replies)
Discussion started by: juzz4fun
2 Replies
6. Shell Programming and Scripting
I have a fasta file as follows
>sp|O15090|FABP4_HUMAN Fatty acid-binding protein, adipocyte OS=Homo sapiens GN=FABP4 PE=1 SV=3
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
KGVTSTRVYERA
>sp|L18484|AP2A2_RAT AP-2... (3 Replies)
Discussion started by: alexypaul
3 Replies
7. Shell Programming and Scripting
Input File:
>Seq1
ASDADAFASFASFADGSDGFSDFSDFSDFSDFSDFSDFSDFSDFSDFSDFSD
>Seq2
SDASDAQEQWEQeqAdfaasd
>Seq3
ASDSALGHIUDFJANCAGPATHLACJHPAUTYNJKG
......
Desired Output File
>Seq1
ASDADAFASF
ASFADGSDGF
SDFSDFSDFS
DFSDFSDFSD
FSDFSDFSDF
SD
>Seq2 (4 Replies)
Discussion started by: patrick87
4 Replies
8. Shell Programming and Scripting
I've been struggling with this one for quite a while and cannot seem to find a solution for this find/replace scenario. Perhaps I'm getting rusty.
I have a file that contains a number of metrics (exactly 3 fields per line) from a few appliances that are collected in parallel. To identify the... (3 Replies)
Discussion started by: verdepollo
3 Replies
9. Shell Programming and Scripting
I have a fasta file as follows
>sp|Q8WWQ8|STAB2_HUMAN Stabilin-2 OS=Homo sapiens OX=9606 GN=STAB2 PE=1 SV=3
MMLQHLVIFCLGLVVQNFCSPAETTGQARRCDRKSLLTIRTECRSCALNLGVKCPDGYTM
ITSGSVGVRDCRYTFEVRTYSLSLPGCRHICRKDYLQPRCCPGRWGPDCIECPGGAGSPC
NGRGSCAEGMEGNGTCSCQEGFGGTACETCADDNLFGPSCSSVCNCVHGVCNSGLDGDGT... (3 Replies)
Discussion started by: jerrild
3 Replies
TALK(1) General Commands Manual TALK(1)
NAME
talk - talk to another user
SYNOPSIS
talk person [ ttyname ]
DESCRIPTION
Talk is a visual communication program which copies lines from your terminal to that of another user.
If you wish to talk to someone on you own machine, then person is just the person's login name. If you wish to talk to a user on another
host, then person is of the form :
host!user or
host.user or
host:user or
user@host
though host@user is perhaps preferred.
If you want to talk to a user who is logged in more than once, the ttyname argument may be used to indicate the appropriate terminal name.
When first called, it sends the message
Message from TalkDaemon@his_machine...
talk: connection requested by your_name@your_machine.
talk: respond with: talk your_name@your_machine
to the user you wish to talk to. At this point, the recipient of the message should reply by typing
talk your_name@your_machine
It doesn't matter from which machine the recipient replies, as long as his login-name is the same. Once communication is established, the
two parties may type simultaneously, with their output appearing in separate windows. Typing control L will cause the screen to be
reprinted, while your erase, kill, and word kill characters will work in talk as normal. To exit, just type your interrupt character; talk
then moves the cursor to the bottom of the screen and restores the terminal.
Permission to talk may be denied or granted by use of the mesg command. At the outset talking is allowed. Certain commands, in particular
nroff and pr(1) disallow messages in order to prevent messy output.
FILES
/etc/hosts to find the recipient's machine
/var/run/utmp to find the recipient's tty
SEE ALSO
mesg(1), who(1), mail(1), write(1)
BUGS
The version of talk(1) released with 4.3BSD uses a protocol that is incompatible with the protocol used in the version released with
4.2BSD.
4.2 Berkeley Distribution November 27, 1996 TALK(1)