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Top Forums Programming awk to count occurrence of strings and loop for multiple columns Post 302918947 by iling14 on Friday 26th of September 2014 10:22:56 AM
Old 09-26-2014
awk to count occurrence of strings and loop for multiple columns

Hi all,

If i would like to process a file input as below:

Code:
col1 col2 col3 ...col100
1 A C E A ...
3 D E G A
5 T T A A 
6 D C A G

how can i perform a for loop to count the occurences of letters in each column? (just like uniq -c ) in every column.

on top of that, i would also like to print out col1 as concatenate form. the expected output would be:

Code:
col2 count col1 col2 count col1 col3 count col1 ...col100 count col1
A 1 1 C 2 1,6
D 2 3,6 E 1 3
T 1 5 T 1 5

Appreciate if you could help me resolve this problem...urgent!!

Thanks

Last edited by Don Cragun; 09-26-2014 at 04:49 PM.. Reason: Add CODE tags.
 

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Text::FormatTable(3pm)					User Contributed Perl Documentation				    Text::FormatTable(3pm)

NAME
Text::FormatTable - Format text tables SYNOPSIS
my $table = Text::FormatTable->new('r|l'); $table->head('a', 'b'); $table->rule('='); $table->row('c', 'd'); print $table->render(20); DESCRIPTION
Text::FormatTable renders simple tables as text. You pass to the constructor (new) a table format specification similar to LaTeX (e.g. "r|l|5l|R|20L") and you call methods to fill the table data and insert rules. After the data is filled, you call the render method and the table gets formatted as text. Methods: new($format) Create a Text::FormatTable object, the format of each column is specified as a character of the $format string. The following formats are defined: l Left-justified top aligned word-wrapped text. L Left-justified bottom aligned word-wrapped text. r Right-justified top aligned word-wrapped text. R Right-justified bottom aligned word-wrapped text. 10R, 20r, 15L, 12l, Number is fixed width of the column. Justified and aligned word-wrapped text (see above). ' ' A space. | Column separator. head($col1, $col2, ...) Add a header row using $col1, $col2, etc. as cell contents. Note that, at the moment, header rows are treated like normal rows. row($col1, $col2, ...) Add a row with $col1, $col2, etc. as cell contents. rule([$char]) Add an horizontal rule. If $char is specified it will be used as character to draw the rule, otherwise '-' will be used. render([$screen_width]) Return the rendered table formatted with $screen_width or 79 if it is not specified. SEE ALSO
Text::ASCIITable COPYRIGHT
Copyright (c) 2001-2004 Swiss Federal Institute of Technology, Zurich. (c) 2009 Trey Harris All Rights Reserved. This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. CODE REPOSITORY
Git - http://github.com/treyharris/Text-FormatTable/tree/master AUTHOR
David Schweikert <dws@ee.ethz.ch> Maintained by Trey Harris <treyharris@gmail.com> Fixed column width and bottom alignment written by Veselin Slavov <vslavov@creditreform.bg> perl v5.10.0 2009-07-24 Text::FormatTable(3pm)
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