Hi,
I have a sun sparc system. I don't have a sun keyboard, hence i connected a pc keyboard.
I would like to know the "STOP A" equivalent command to be used on pc keyboard.
Regards,
Raja (4 Replies)
Hi all,
We have CVS server running for few years with absolutely no problems.
Because of conditions not depending on me, I'm forced to move some part of our repository to another server (SVN). I need to move ONLY one branch from CVS server to SVN server. The branch must be moved with all... (7 Replies)
Hi all,
I have a requirement where the variable name starts with $, like
$Amd=/home/student/test/
How to work wit it? can some one help me, am in gr8 confusion:confused: (5 Replies)
Hi there,
I am lil confused with the following issue.
I have a File, which has the following header: IMSHRATE_043008_101016
a sample detailed record is :9820101 A982005000CAVG030108000000000000010169000MAR 2008
9820102 MAR 2008 D030108
... (1 Reply)
Hi,
I have 80 large files, from which I want to get a specific value to run a Bash script. Firstly, I want to get the part of a file which contains this:
Name =A
xxxxxx
yyyyyy
zzzzzz
aaaaaa
bbbbbb
Value = 57
This is necessary because in a file there are written more lines which... (6 Replies)
Hi all,
I have a file like this
ID 3BP5L_HUMAN Reviewed; 393 AA.
AC Q7L8J4; Q96FI5; Q9BQH8; Q9C0E3;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 05-SEP-2012, entry version 71.
FT COILED 59 140 ... (1 Reply)
If I run rm -rf * command under one parent directory.
/data > rm -rf *
Is there anyway to know which files will be deleted first ?
Start using code tags please, ty. (2 Replies)
I am on linux red hat, want to use the logic within bash shell script file.
I have the following type, named files in folder /staging, want to move with new filename just the firstpart upto underscore, example 20180904105056.dat, how can i get upto first part of filename and validate to chk if... (2 Replies)
Hi All,
We've a VDI infrastructure in AWS (AWS workspaces) and we're planning to automate the process of provisioning workspaces. Instead of going to GUI console, and launching workspaces by selecting individual users is little time consuming. Thus, I want to create them in bunches from AWS CLI... (6 Replies)
Discussion started by: arun_adm
6 Replies
LEARN ABOUT DEBIAN
bp_bioflat_index
BP_BIOFLAT_INDEX(1p) User Contributed Perl Documentation BP_BIOFLAT_INDEX(1p)NAME
bioflat_index.pl - index sequence files using Bio::DB::Flat
DESCRIPTION
Create or update a biological sequence database indexed with the
Bio::DB::Flat indexing scheme. The arguments are a list of flat files
containing the sequence information to be indexed.
USAGE
bioflat_index.pl <options> file1 file2 file3...
Options:
--create Create or reinitialize the index. If not specified,
the index must already exist.
--format <format> The format of the sequence files. Must be one
of "genbank", "swissprot", "embl" or "fasta".
--location <path> Path to the directory in which the index files
are stored.
--dbname <name> The symbolic name of the database to be created.
--indextype <type> Type of index to create. Either "bdb" or "flat".
"binarysearch" is the same as "flat".
Options can be abbreviated. For example, use -i for --indextype.
The following environment variables will be used as defaults if the corresponding options are not provided:
OBDA_FORMAT format of sequence file
OBDA_LOCATION path to directory in which index files are stored
OBDA_DBNAME name of database
OBDA_INDEX type of index to create
perl v5.14.2 2012-03-02 BP_BIOFLAT_INDEX(1p)