Thanks a lot for your quick response.
I am not really clear about your question above but, I am extracting info for gene features and that's how to find out the region for the coding sequence.
i tried your code but it did not give accurate results on my real data. I tried to change and play around with your code but still the result is not correct. below is the sample result that i got:-
Code:
SP12.5 CD 2249762 2249821 - ID2_N006 ID2_N006T1
SP12.5 CD 3004994 3005025 + D2_N0114 ID2_N01140T0
SP12.5 CD 2249762 2249821 - ID2_N006 ID2_N006T0
SP12.5 CD 2241471 2241681 + ID2_N003 ID2_N003T0
If u don't mind, can you explain about your codes? The above data is just a sample. for $1, i have many different values, not only SP12.3. So, i changed "print "SP12.3"" to print "$1". But the output is still wrong. Thanks
Hello every one, I have following data
***CAMPAIGN 1998 CONTRIBUTIONS***
---------------------------------------------------------------------------
NAME PHONE Jan | Feb | Mar | Total Donated
... (12 Replies)
hi, i have an awk script and I managed to figure out how to search the max value but Im having difficulty in searching for the min field value.
BEGIN {FS=","; max=0}
NF == 7 {if (max < $6) max = $6;}
END { print man, min}
where $6 is the column of a field separated by a comma (3 Replies)
Hi guys!
I'm new to scripting and I need to write a script in awk.
Here is example of file on which I'm working
ATOM 4688 HG1 PRO A 322 18.080 59.680 137.020 1.00 0.00
ATOM 4689 HG2 PRO A 322 18.850 61.220 137.010 1.00 0.00
ATOM 4690 CD ... (18 Replies)
Hi guys,
I already search on the forum but i can't solve this on my own.
I have a lot of files like this:
And i need to print the line with the maximum value in last column but if the value is the same (2 in this exemple for the 3 last lines) i need get the line with the minimum value in... (4 Replies)
Hi,
I have a file which looks like this:
FID IID MISS_PHENO N_MISS N_GENO F_MISS
12AB43131 12AB43131 N 17774 906341 0.01961
65HJ87451 65HJ87451 N 10149 906341 0.0112
43JJ21345 43JJ21345 N 2826 906341 0.003118I would... (11 Replies)
aaa: 3 ms
aaa: 2 ms
aaa: 5 ms
aaa: 10 ms
..........
to get the 3 2 5 10 ...'s min avg and max
something like
min: 2 ms avg: 5 ms max: 10 ms (2 Replies)
I need to find the max/min of columns 1 and 2 of a 2 column file what contains the special character ">".
I know that this will find the max value of column 1.
awk 'BEGIN {max = 0} {if ($1>max) max=$1} END {print max}' input.file
But what if I needed to ignore special characters in the... (3 Replies)
I am trying to get a simple min/max script to work with the below input. Note the special character (">") within it.
Script
awk 'BEGIN{max=0}{if(($1)>max) max=($1)}END {print max}'
awk 'BEGIN{min=0}{if(($2)<min) min=($2)}END {print min}'
Input
-122.2840 42.0009
-119.9950 ... (7 Replies)
Locale::Language(3perl) Perl Programmers Reference Guide Locale::Language(3perl)NAME
Locale::Language - standard codes for language identification
SYNOPSIS
use Locale::Language;
$lang = code2language('en'); # $lang gets 'English'
$code = language2code('French'); # $code gets 'fr'
@codes = all_language_codes();
@names = all_language_names();
DESCRIPTION
The "Locale::Language" module provides access to standard codes used for identifying languages, such as those as defined in ISO 639.
Most of the routines take an optional additional argument which specifies the code set to use. If not specified, the default ISO 639 two-
letter codes will be used.
SUPPORTED CODE SETS
There are several different code sets you can use for identifying languages. The ones currently supported are:
alpha-2
This is the set of two-letter (lowercase) codes from ISO 639, such as 'he' for Hebrew.
This code set is identified with the symbol "LOCALE_LANG_ALPHA_2".
This is the default code set.
alpha-3
This is the set of three-letter (lowercase) bibliographic codes from ISO 639, such as 'heb' for Hebrew.
This code set is identified with the symbol "LOCALE_LANG_ALPHA_3".
term
This is the set of three-letter (lowercase) terminologic codes from ISO 639.
This code set is identified with the symbol "LOCALE_LANG_TERM".
ROUTINES
code2language ( CODE [,CODESET] )
language2code ( NAME [,CODESET] )
language_code2code ( CODE ,CODESET ,CODESET2 )
all_language_codes ( [CODESET] )
all_language_names ( [CODESET] )
Locale::Language::rename_language ( CODE ,NEW_NAME [,CODESET] )
Locale::Language::add_language ( CODE ,NAME [,CODESET] )
Locale::Language::delete_language ( CODE [,CODESET] )
Locale::Language::add_language_alias ( NAME ,NEW_NAME )
Locale::Language::delete_language_alias ( NAME )
Locale::Language::rename_language_code ( CODE ,NEW_CODE [,CODESET] )
Locale::Language::add_language_code_alias ( CODE ,NEW_CODE [,CODESET] )
Locale::Language::delete_language_code_alias ( CODE [,CODESET] )
These routines are all documented in the Locale::Codes man page.
SEE ALSO
Locale::Codes
Locale::Constants
http://www.loc.gov/standards/iso639-2/
Source of the ISO 639 codes.
AUTHOR
See Locale::Codes for full author history.
Currently maintained by Sullivan Beck (sbeck@cpan.org).
COPYRIGHT
Copyright (c) 1997-2001 Canon Research Centre Europe (CRE).
Copyright (c) 2001-2010 Neil Bowers
Copyright (c) 2010-2011 Sullivan Beck
This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
perl v5.14.2 2011-09-26 Locale::Language(3perl)