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Top Forums Shell Programming and Scripting How to get min and max values using awk? Post 302911754 by redse171 on Saturday 2nd of August 2014 07:35:12 PM
Old 08-02-2014
Hi RudiC,

Thanks a lot for your quick response.
I am not really clear about your question above but, I am extracting info for gene features and that's how to find out the region for the coding sequence.

i tried your code but it did not give accurate results on my real data. I tried to change and play around with your code but still the result is not correct. below is the sample result that i got:-


Code:
SP12.5	CD	2249762	2249821	-	ID2_N006	 ID2_N006T1
SP12.5	CD	3004994	3005025	+	D2_N0114	ID2_N01140T0
SP12.5	CD	2249762	2249821	-	ID2_N006	 ID2_N006T0
SP12.5	CD	2241471	2241681	+	ID2_N003	 ID2_N003T0

If u don't mind, can you explain about your codes? The above data is just a sample. for $1, i have many different values, not only SP12.3. So, i changed "print "SP12.3"" to print "$1". But the output is still wrong. Thanks

Last edited by redse171; 08-03-2014 at 06:23 PM..
 

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ADD(2)								System Calls Manual							    ADD(2)

NAME
add, sub, mul, div, raddp, rsubp, rmul, rdiv, rshift, inset, rcanon, eqpt, eqrect, ptinrect, rectinrect, rectXrect, rectclip, Dx, Dy, Pt, Rect, Rpt - arithmetic on points and rectangles SYNOPSIS
#include <u.h> #include <libc.h> #include <libg.h> Point add(Point p, Point q) Point sub(Point p, Point q) Point mul(Point p, int a) Point div(Point p, int a) Rectangle raddp(Rectangle r, Point p) Rectangle rsubp(Rectangle r, Point p) Rectangle rmul(Rectangle r, int a) Rectangle rdiv(Rectangle r, int a) Rectangle rshift(Rectangle r, int a) Rectangle inset(Rectangle r, int n) Rectangle rcanon(Rectangle r) int eqpt(Point p, Point q) int eqrect(Rectangle r, Rectangle s) int ptinrect(Point p, Rectangle r) int rectinrect(Rectangle r, Rectangle s) int rectXrect(Rectangle r, Rectangle s) int rectclip(Rectangle *rp, Rectangle b) int Dx(Rectangle r) int Dy(Rectangle r) Point Pt(int x, int y) Rectangle Rect(int x0, int y0, int x1, int y1) Rectangle Rpt(Point p, Point q) DESCRIPTION
The functions Pt, Rect and Rpt construct geometrical data types from their components. These are implemented as macros. Add returns the Point sum of its arguments: Pt(p.x+q.x, p.y+q.y). Sub returns the Point difference of its arguments: Pt(p.x-q.x, p.y-q.y). Mul returns the Point Pt(p.x*a, p.y*a). Div returns the Point Pt(p.x/a, p.y/a). Raddp returns the Rectangle Rect(add(r.min, p), add(r.max, p)); rsubp returns the Rectangle Rpt(sub(r.min, p), sub(r.max, p)). Rmul returns the Rectangle Rpt(mul(r.min,a), mul(r.max,a)); Rdiv returns the Rectangle Rpt(div(r.min,a), div(r.max,a)). Rshift returns the rectangle r with all coordinates either left-shifted or right-shifted by a, depending on whether a is positive or nega- tive, respectively. Inset returns the Rectangle Rect(r.min.x+n, r.min.y+n, r.max.x-n, r.max.y-n). Rcanon returns a rectangle with the same extent as r, canonicalized so that min.x <= max.x, and min.y <= max.y. Eqpt compares its argument Points and returns 0 if unequal, 1 if equal. Eqrect does the same for its argument Rectangles. Ptinrect returns 1 if p is a point within r, and 0 otherwise. Rectinrect returns 1 if all the pixels in r are also in s, and 0 otherwise. RectXrect returns 1 if r and s share any point, and 0 otherwise. Rectclip clips in place the Rectangle pointed to by rp so that it is completely contained within b. The return value is 1 if any part of *rp is within b. Otherwise, the return value is 0 and *rp is unchanged. The functions Dx and Dy give the width (x) and height (y) of a Rectangle. They are implemented as macros. SOURCE
/sys/src/libg SEE ALSO
graphics(2) ADD(2)
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