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Top Forums Shell Programming and Scripting How to get min and max values using awk? Post 302911754 by redse171 on Saturday 2nd of August 2014 07:35:12 PM
Old 08-02-2014
Hi RudiC,

Thanks a lot for your quick response.
I am not really clear about your question above but, I am extracting info for gene features and that's how to find out the region for the coding sequence.

i tried your code but it did not give accurate results on my real data. I tried to change and play around with your code but still the result is not correct. below is the sample result that i got:-


Code:
SP12.5	CD	2249762	2249821	-	ID2_N006	 ID2_N006T1
SP12.5	CD	3004994	3005025	+	D2_N0114	ID2_N01140T0
SP12.5	CD	2249762	2249821	-	ID2_N006	 ID2_N006T0
SP12.5	CD	2241471	2241681	+	ID2_N003	 ID2_N003T0

If u don't mind, can you explain about your codes? The above data is just a sample. for $1, i have many different values, not only SP12.3. So, i changed "print "SP12.3"" to print "$1". But the output is still wrong. Thanks

Last edited by redse171; 08-03-2014 at 06:23 PM..
 

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Vend::Ship::Postal(3pm) 				User Contributed Perl Documentation				   Vend::Ship::Postal(3pm)

NAME
Vend::Ship::Postal -- Calculate US Postal service international rates SYNOPSIS
(in catalog.cfg) Database usps ship/usps.txt TAB Database air_pp ship/air_pp.txt TAB Database surf_pp ship/surf_pp.txt TAB (in shipping.asc) air_pp: US Postal Air Parcel crit weight min 0 max 0 cost e No shipping needed! at_least 4 adder 1 aggregate 70 table air_pp min 0 max 1000 cost s Postal min 70 max 9999999 cost e Too heavy for Air Parcel surf_pp: US Postal Surface Parcel crit weight min 0 max 0 cost e No shipping needed! at_least 4 adder 1 aggregate 70 table surf_pp min 0 max 1000 cost s Postal min 70 max 9999999 cost e Too heavy for Postal Parcel DESCRIPTION
Looks up a service zone by country in the "usps" table, then looks in the appropriate rate table for a price by that zone. Can aggregate shipments greater than 70 pounds by assuming you will ship multiple 70-pound packages (plus one package with the remainder). perl v5.14.2 2010-03-25 Vend::Ship::Postal(3pm)
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