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Full Discussion: Find the missing sequence
Top Forums Shell Programming and Scripting Find the missing sequence Post 302911343 by sagar_1986 on Thursday 31st of July 2014 08:48:36 AM
Old 07-31-2014
Find the missing sequence

Dear all

i am having file with max 24 entries. i want to find which sequence is missing

file is like this
Code:
df00231587.dat
df01231587.dat
df03231587.dat
df05231587.dat
.
.
.
df23231587.dat

the changing seq is 00-23,so i would like to find out which seq is missing like in above file seq 02 and 04 is missing

so the output shoould be like this
Code:
02231587
04231587

is missing and leading zero is important.

thanks in advance
Moderator's Comments:
Mod Comment Please use CODE tags (not QUOTE tags) when displaying sample input, output, and code segments.

Last edited by Don Cragun; 08-02-2014 at 05:02 PM.. Reason: Change QUOTE tags to CODE tags.
 

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UNKNOWN(1)						      General Commands Manual							UNKNOWN(1)

NAME
unknown - identify possible genotypes for unknowns SYNOPSIS
A program to rapidly identify which genotypes are possible for individuals typed as unknowns in the input pedigree. unknown [ -cl ] DESCRIPTION
unknown infers possible genotypes and mating combinations for parents with unknown genotypes for ilink(1), mlink(1) and linkmap(1). OPTIONS
-c Use conditional allele frequencies. -l Choose a good set of loop breakers automatically. RETURN VALUE
0 Successful completion ERRORS
10 File not found 255 Failure EXAMPLES
Normally, unknown(1) is run immediately prior to its sister programs, ilink(1), mlink(1) and linkmap(1), like this: unknown mlink FILES
unknown(1) reads the two files pedfile.dat and datafile.dat as its own input and produces various temporary files that are used as input to the next program. These temporary files are ipedfile.dat, upedfile.dat, speedfile.dat and newspeedfile.dat. NOTES
unknown(1) is part of the FASTLINK package, which is a re-implementation of the LINKAGE suite of computer tools that help investigate genetic linkage as first proposed G.M. Lathrop, J.M. Lalouel, C. Julier, and J. Ott. AUTHORS
Dylan Cooper, Alejandro Schaffer, and Tony Schurtz based on work originally by Jurg Ott, Ph.D, et. al. This manual page was written by Elizabeth Barham <lizzy@soggytrousers.net> for the Debian GNU/Linux system (but may be used by others). WORD-WIDE-WEB http://www.ncbi.nlm.nih.gov/CBBResearch/Schaffer/fastlink.html SEE ALSO
ilink(1), linkmap(1), lodscore(1), mlink(1). April 15, 2003 UNKNOWN(1)
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