07-09-2014
Hi, I was using your second program, wanted to know how to run this program using a script? Just saving in a .sh file would work ?
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I like to know how can we calculate the number of rows and the average of the values present in the file. I will not know what will be the rowcount, which will be dynamic in nature of the file.
eg.
29
33
48
30
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I want to duplicate a row if found two or more values in a particular column for corresponding row which is delimitted by comma.
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I am new to this forum and this is my first post.
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Dear All,
I have this file tab delimited
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I have a dataset with 120 columns. I would like to write a script, that takes the average of every two columns, starting from columns 2 and 3, and moving consecutively in frames of 3 columns, all the way until the last column.
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Dear Experts,
Kindly help me please,
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Hi Friends,
My input file
Gene1 10 20 0
Gene2 5 0 15
Gene3 10 10 10
Gene4 5 0 0
If there is a zero for any gene in any column, I don't want that column to be considered which reduces the denominator value during average.
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Hello
I have a file like this:
> cat examplefile
ghi|NN603762|eee
mno|NN607265|ttt
pqr|NN613879|yyy
stu|NN615002|uuu
jkl|NN607265|rrr
vwx|NN615002|iii
yzA|NN618555|ooo
def|NN190486|www
BCD|NN628717|ppp
abc|NN190486|qqq
EFG|NN628717|aaa
HIJ|NN628717|sss
>
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I have no idea how to even get started with this script.
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pfspad(1) General Commands Manual pfspad(1)
NAME
pfspad - Add borders to a frame in PFS stream
SYNOPSIS
pfspad [--left <columns>] [--right <columns>] [--top <rows>] [--bottom <rows>] [--width <new_width>] [--height <new_height>] [--R <val>]
[--G <val>] [--B <val>] [--Y <val>] [--help]
DESCRIPTION
Add borders to each frame in PFS stream. User specifies size of left, right, top and bottom border or size of an output image. Color of
borders can be specified as well.
OPTIONS
--left <columns>, -l <columns>
Width in pixels of the left border.
--right <columns>, -r <columns>
Width in pixels of the right border.
--top <rows>, -t <rows>
Height in pixels of the top border.
--bottom <rows>, -b <rows>
Height in pixels of the bottom border.
--width <new_width>, -W <new_width>
Width of an output image. Note that --width can be mixed with either --left or --right option.
--height <new_height>, -H <new_height>
Height of an output image. Note that --height can be mixed with either --top or --bottom option.
--R <val>, -R <val>, --G <val>, -G <val>, --B <val>, -B <val>
Color of borders in RGB mode. Default color is black, and if some of the components is not specified, its value is set to 0.0.
--Y <val>, -Y <val>
Color of borders in luminance mode.
--help, -h
Print a list of commandline options.
EXAMPLES
pfsin image.hdr | pfspad --left 50 --bottom 20 | pfsout out.hdr
Add 50 columns to the left and 20 rows to the bottom side of image.hdr. Color of borders is default black.
pfsin image.hdr | pfspad --top 20 --height 500 --width 400 --R 1.0 | pfsout out.hdr
Add 20 rows to the top side of image.hdr and create output image out.hdr 500 pixels in height and 400 pixels in width. Color of bor-
ders is set to red.
SEE ALSO
pfsin(1) pfsout(1)
BUGS
Please report bugs and comments to Dorota Zdrojewska <dzdrojewska@wi.ps.pl>.
pfspad(1)