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Shell Programming and Scripting
Find biggest values on replicates
Post 302907918 by CarloM on Wednesday 2nd of July 2014 11:21:33 AM
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Hi All,
Please help me out
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Thanks in advance
Regards,
Manas (8 Replies)
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Hi,
I need help to find values between two different fields based on $6 (NUM) AND $1 (CD), within the same ID. The result should show the values between the NUMs which will be extracted from within $3 and $2 in data.txt file below.
data.txt
ex 139 142 Sc_1000004 ID 4
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3. Shell Programming and Scripting
Hi,
I wanna find the biggest number inside of a file
this is kind of example of file:
9
11
55
then i just wanna print out the biggest number
i had try sed filenale | sort -k1,1n | paste -s -d',' -
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4. Shell Programming and Scripting
With any cmd like sed grep ask etc... (1 Reply)
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5. Shell Programming and Scripting
Hi All
I hope that someone could help me!
I have an input file like this, with 4 colum(ID, feature1, start, end):
a x 1 5
b x 3 10
b x 4 9
b x 5 16
c x 5 9
c x 4 8
And my output file should be like this:
a x 1 5
b x 3 16
c x 4 9
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6. Shell Programming and Scripting
Hi All
I need to find the smallest values between replicates id (column1)
Input file:
a name1 1200
a name2 800
b name1 100
b name2 150
b name3 4output:
a name2 800
b name3 4
Do you have any suggestion?
Thank you! (9 Replies)
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7. Shell Programming and Scripting
Hi All
I have a question.
I have a file like this:
10 name1 ID1 value1 value2 valueN..
31 name2 ID1 value1 value2 valueN..
20 name3 ID2 value1 value2 valueN..
23 name4 ID2 value1 value2 valueN..
33 name5 ID2 value1 value2 valueN..
45 name6 ID2 value1 value2 valueN..
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8. Shell Programming and Scripting
Dear All,
I was wondering if you may help me with an issue.
I would like to merge row based on column 1.
input file:
b1 ggg b2 fff NA NA hhh NA NA NA NA NA
a1 xxx a2 yyy NA NA zzz NA NA NA NA NA
a1 xxx NA NA a3 ttt NA ggg NA NA NA NA
output file:
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LEARN ABOUT SUNOS
bzdiff
BZDIFF(1) General Commands Manual BZDIFF(1) NAME
bzcmp, bzdiff - compare bzip2 compressed files SYNOPSIS
bzcmp [ cmp_options ] file1 [ file2 ] bzdiff [ diff_options ] file1 [ file2 ] DESCRIPTION
Bzcmp and bzdiff are used to invoke the cmp or the diff program on bzip2 compressed files. All options specified are passed directly to cmp or diff. If only 1 file is specified, then the files compared are file1 and an uncompressed file1.bz2. If two files are specified, then they are uncompressed if necessary and fed to cmp or diff. The exit status from cmp or diff is preserved. ATTRIBUTES
See attributes(5) for descriptions of the following attributes: +--------------------+-----------------+ | ATTRIBUTE TYPE | ATTRIBUTE VALUE | +--------------------+-----------------+ |Availability | SUNWbzip | +--------------------+-----------------+ |Interface Stability | External | +--------------------+-----------------+ SEE ALSO
cmp(1), diff(1), bzmore(1), bzless(1), bzgrep(1), bzip2(1) BUGS
Messages from the cmp or diff programs refer to temporary filenames instead of those specified. BZDIFF(1)