I have a lot of files with same number of rows and columns.$2 and $3 are the same in all files .
I need to merge $2,$3,$6 from first file and $6 from another files.
File1:
File2:
File3:
and so on....
Expected Result:
Thanks in advance
Last edited by ali.seifaddini; 05-26-2014 at 05:32 AM..
Hi may i ask how to accomplish this task:
I have 2 files which has multiple columns
first file
1 a
2 b
3 c
4 d
second file
14 a 9 ....
13 b 10....
12 c 11...
11 d 12...
I want to merge the second file to first file that will looks like this
... (2 Replies)
Hi everyone. How can I merge two files, where each file has 2 columns and the first columns in both files are similar? I want all in a file of 4 columns; join command removes the duplicate columns.
1 Dave
2 Mark
3 Paul
1 Apple
2 Orange
3 Grapes
to get it like this in the 3rd file:... (9 Replies)
Hi,
I have tab limited file 1
and tab limited file 2
The output should contain common first column vales and corresponding 2nd column values; AND also unique first column value with corresponding 2nd column value of the file that contains it and 0 for the second file.
the output should... (10 Replies)
Hi all,
I'm looking for a way to merge multiple columns (from one file) into a single column in an output file.
The file I have looks somewhat like this:
@HWI-ST212 1:N:0 AGTCCTACCGGGAGT + @@@DDDDDHHHHHII
@HWI-ST212 1:N:0 CGTTTAAAAATTTCT + @;@B;DDDDH?:F;F... (4 Replies)
Hi all, I've searched the web for a long time trying to figure out how to merge columns from multiple files.
I know paste will append columns like so:
paste file1 file2 file3 file4 file5 ...
But this becomes inconvenient when you want to append a large number of files into a single file.
... (2 Replies)
Hello, I have two files that have this format:
file 1
86.82 0.00 86.82 43.61
86.84 0.00 86.84 43.61
86.86 0.00 86.86 43.61
86.88 0.00 86.88 43.61
file 2
86.82 0.22
86.84 0.22
86.86 0.22
86.88 0.22
I would like to merge these two files such that the final file looks like... (5 Replies)
Hi,
I have a file with 16 columns and out of these 16 columns 14 are key columns, 15 th is order column and 16th column is having information. I need to concate the 16th column based on value of 1-14th column as key in order of 15th column. Here are the example file
Input File (multiple... (3 Replies)
I will like to merge several files using 'cat', but I observe the output is not consistent. the merge begins at the last line of the first file.
file1.txt:
1234
1234
1234
file2.txt:
aaaa
bbbb
cccc
dddd
cat file1.txt file2.txt > file3.txt
file3.txt:
1234
1234
1234aaaa
bbbb
cccc... (13 Replies)
Join and merge multiple files with duplicate key and fill void columns
Hi guys,
I have many files that I want to merge:
file1.csv:
1|abc
1|def
2|ghi
2|jkl
3|mno
3|pqr
file2.csv: (5 Replies)
Discussion started by: yjacknewton
5 Replies
LEARN ABOUT CENTOS
funtbl
funtbl(1) SAORD Documentation funtbl(1)NAME
funtbl - extract a table from Funtools ASCII output
SYNOPSIS
funtable [-c cols] [-h] [-n table] [-p prog] [-s sep] <iname>
DESCRIPTION
[NB: This program has been deprecated in favor of the ASCII text processing support in funtools. You can now perform fundisp on funtools
ASCII output files (specifying the table using bracket notation) to extract tables and columns.]
The funtbl script extracts a specified table (without the header and comments) from a funtools ASCII output file and writes the result to
the standard output. The first non-switch argument is the ASCII input file name (i.e. the saved output from funcnts, fundisp, funhist,
etc.). If no filename is specified, stdin is read. The -n switch specifies which table (starting from 1) to extract. The default is to
extract the first table. The -c switch is a space-delimited list of column numbers to output, e.g. -c "1 3 5" will extract the first
three odd-numbered columns. The default is to extract all columns. The -s switch specifies the separator string to put between columns.
The default is a single space. The -h switch specifies that column names should be added in a header line before the data is output. With-
out the switch, no header is prepended. The -p program switch allows you to specify an awk-like program to run instead of the default
(which is host-specific and is determined at build time). The -T switch will output the data in rdb format (i.e., with a 2-row header of
column names and dashes, and with data columns separated by tabs). The -help switch will print out a message describing program usage.
For example, consider the output from the following funcnts command:
[sh] funcnts -sr snr.ev "ann 512 512 0 9 n=3"
# source
# data file: /proj/rd/data/snr.ev
# arcsec/pixel: 8
# background
# constant value: 0.000000
# column units
# area: arcsec**2
# surf_bri: cnts/arcsec**2
# surf_err: cnts/arcsec**2
# summed background-subtracted results
upto net_counts error background berror area surf_bri surf_err
---- ------------ --------- ------------ --------- --------- --------- ---------
1 147.000 12.124 0.000 0.000 1600.00 0.092 0.008
2 625.000 25.000 0.000 0.000 6976.00 0.090 0.004
3 1442.000 37.974 0.000 0.000 15936.00 0.090 0.002
# background-subtracted results
reg net_counts error background berror area surf_bri surf_err
---- ------------ --------- ------------ --------- --------- --------- ---------
1 147.000 12.124 0.000 0.000 1600.00 0.092 0.008
2 478.000 21.863 0.000 0.000 5376.00 0.089 0.004
3 817.000 28.583 0.000 0.000 8960.00 0.091 0.003
# the following source and background components were used:
source_region(s)
----------------
ann 512 512 0 9 n=3
reg counts pixels sumcnts sumpix
---- ------------ --------- ------------ ---------
1 147.000 25 147.000 25
2 478.000 84 625.000 109
3 817.000 140 1442.000 249
There are four tables in this output. To extract the last one, you can execute:
[sh] funcnts -s snr.ev "ann 512 512 0 9 n=3" | funtbl -n 4
1 147.000 25 147.000 25
2 478.000 84 625.000 109
3 817.000 140 1442.000 249
Note that the output has been re-formatted so that only a single space separates each column, with no extraneous header or comment informa-
tion.
To extract only columns 1,2, and 4 from the last example (but with a header prepended and tabs between columns), you can execute:
[sh] funcnts -s snr.ev "ann 512 512 0 9 n=3" | funtbl -c "1 2 4" -h -n 4 -s " "
#reg counts sumcnts
1 147.000 147.000
2 478.000 625.000
3 817.000 1442.000
Of course, if the output has previously been saved in a file named foo.out, the same result can be obtained by executing:
[sh] funtbl -c "1 2 4" -h -n 4 -s " " foo.out
#reg counts sumcnts
1 147.000 147.000
2 478.000 625.000
3 817.000 1442.000
SEE ALSO
See funtools(7) for a list of Funtools help pages
version 1.4.2 January 2, 2008 funtbl(1)