1. Shell Programming and Scripting

Hello all, I have a list of reports for stores that are numbered like: s001845,s000022,s198490,s020048,s002385 however the users are displaying the reports as: 1845,22,198490,20048,2385 It isn't real critical but I would like to associate them so they are the same. And since the users are... (2 Replies)

2. Shell Programming and Scripting

Hi all- I've got a file that will have multiple columns. In one column there will be a string that is 10 digits in length, but I need to trim the first four zeros to make it 6 characters? example: 0000001234 0000123456 0000234566 0000000321 output: 001234 123456 234566 000321 (5 Replies)

3. Shell Programming and Scripting

Hi. I have a tab separated file that has a couple nearly identical lines. When doing: sort file | uniq > file.new It passes through the nearly identical lines because, well, they still are unique. a) I want to look only at field x for uniqueness and if the content in field x is the... (1 Reply)

4. Shell Programming and Scripting

How do I print all the fields of a record except for the $(NF) field? (4 Replies)

5. Shell Programming and Scripting

Hi, Is there any short method to print from a particular field till another filed using awk? Example File: File1 ==== 1|2|acv|vbc|......|100|342 2|3|afg|nhj|.......|100|346 Expected output: File2 ==== acv|vbc|.....|100 afg|nhj|.....|100 (8 Replies)

6. Shell Programming and Scripting

Hello; I have a file consists of 4 columns separated by tab. The problem is the third fields. Some of the them are very long but can be split by the vertical bar "|". Also some of them do not contain the string "UniProt", but I could ignore it at this moment, and sort the file afterwards. Here is... (5 Replies)

7. Shell Programming and Scripting

Hi experts, I need to print the first field first then last two fields should come next and then i need to print rest of the fields. Input : a1,abc,jsd,fhf,fkk,b1,b2 a2,acb,dfg,ghj,b3,c4 a3,djf,wdjg,fkg,dff,ggk,d4,d5 Expected output: a1,b1,b2,abc,jsd,fhf,fkk... (6 Replies)

8. Shell Programming and Scripting

In the below I am trying to use awk to match all the $13 values in input, which is tab-delimited, that are in $1 of gene which is just a single column of text. However only the line with the greatest $9 value in input needs to be printed. So in the example below all the MECP2 and LTBP1... (0 Replies)

9. Shell Programming and Scripting

I am trying to remove all the lines and spaces where the count in $4 or $5 is greater than 1 (more than 1 letter). The file and the output are tab-delimited. Thank you :). file X 5811530 . G C NLGN4X 17 10544696 . GA G MYH3 9 96439004 . C ... (1 Reply)

10. Shell Programming and Scripting

In the awk below I am trying to print the entire line, along with the header row, if $2 is SNV or MNV or INDEL. If that condition is met or is true, and $3 is less than or equal to 0.05, then in $7 the sub pattern :GMAF= is found and the value after the = sign is checked. If that value is less than... (0 Replies)