05-02-2014
You might want to check
this IBM document (especially p53) for further reference.
I hope this helps.
bakunin
This User Gave Thanks to bakunin For This Post:
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LEARN ABOUT DEBIAN
go::objfactory
GO::ObjFactory(3pm) User Contributed Perl Documentation GO::ObjFactory(3pm)
NAME
GO::ObjFactory - GO Object Factory
SYNOPSIS
You should not use this method directly
DESCRIPTION
You only need to be aware of this class if you are generating new objects. You should not directly create objects like this:
$term = GO::Model::Term->new($h);
Instead you should create them like this:
$fac = GO::ObjFactory->new();
$term = $fac->create_term_obj($h);
Usually you do not need to instantiate a factory, as all objects created with a factory carry around a reference to that factory, so you
can do this:
# $graph object was previously created via a factory
$term = $graph->create_term_obj($h);
If you are only using the go-perl module, then factories do not buy you much. However, if you are also using go-db-perl and GO::AppHandle,
then factories can be useful - all objects generated from the database will be attached to an AppHandle which means that "lazy loading" can
be used. See GO::AppHandle in go-db-perl for details
create_term_obj
Usage - $term = $apph->create_term_obj;
Returns - L<GO::Model::Term>
Args -
create_relationship_obj
Usage - $relationship = $apph->create_relationship_obj;
Returns - L<GO::Model::Relationship>
Args -
create_xref_obj
Usage - $xref = $apph->create_xref_obj;
Returns - L<GO::Model::Xref>
Args -
create_evidence_obj
Usage - $evidence = $apph->create_evidence_obj;
Returns - L<GO::Model::Evidence>
Args -
create_seq_obj
Usage - $seq = $apph->create_seq_obj;
Returns - L<GO::Model::Seq>
Args -
create_db_obj
Usage - $db = $apph->create_db_obj;
Returns - L<GO::Model::DB>
Args -
create_association_obj
Usage - $association = $apph->create_association_obj;
Returns - L<GO::Model::Association>
Args -
create_gene_product_obj
Usage - $gene_product = $apph->create_gene_product_obj;
Synonym - create_product_obj
Returns - L<GO::Model::GeneProduct>
Args -
create_species_obj
Usage - $species = $apph->create_species_obj;
Returns - L<GO::Model::Species>
Args -
create_graph_obj
Usage - $graph = $apph->create_graph_obj;
Returns - L<GO::Model::Graph>
Args -
perl v5.14.2 2010-05-12 GO::ObjFactory(3pm)