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Full Discussion: Honey, I broke awk! (duplicate line removal in 30M line 3.7GB csv file)
Top Forums Shell Programming and Scripting Honey, I broke awk! (duplicate line removal in 30M line 3.7GB csv file) Post 302894691 by Michael Stora on Wednesday 26th of March 2014 06:20:47 PM
Old 03-26-2014
Thanks for all the suggestions. My workaround so far has been to skip the duplicate line removal and add it to the querries I run against the database instead. This has allowed me to procede with my analysis.

I will go back and fix the database at some point however when the current deadline passes.

I will have to check closely which fields alone can indicate a duplicate record. Since the addition of a column (and therefore the length of $0) is what broke it, taking something out may help. I'm not sure as I am already taking the important columns from two types of database files and the "housekeeping columns" are not included.

Is there a way to do a checksum or fairly robust hash in awk? That might be the best way to shorten the array names which appears to what is killing awk.

Mike

PS. I would love to be using real Linux instead of Cygwin (as I do at home). Unfortunately that is a boundary condition.
Last edited by Michael Stora; 03-26-2014 at 08:03 PM..
 

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LEARN ABOUT FREEBSD

colrm

COLRM(1)						    BSD General Commands Manual 						  COLRM(1)

NAME

     colrm -- remove columns from a file

SYNOPSIS

     colrm [start [stop]]

DESCRIPTION

     The colrm utility removes selected columns from the lines of a file.  A column is defined as a single character in a line.  Input is read
     from the standard input.  Output is written to the standard output.

     If only the start column is specified, columns numbered less than the start column will be written.  If both start and stop columns are spec-
     ified, columns numbered less than the start column or greater than the stop column will be written.  Column numbering starts with one, not
     zero.

     Tab characters increment the column count to the next multiple of eight.  Backspace characters decrement the column count by one.

ENVIRONMENT

     The LANG, LC_ALL and LC_CTYPE environment variables affect the execution of colrm as described in environ(7).

EXIT STATUS

     The colrm utility exits 0 on success, and >0 if an error occurs.

SEE ALSO

     awk(1), column(1), cut(1), paste(1)

HISTORY

     The colrm command appeared in 3.0BSD.

BSD
								  August 4, 2004							       BSD
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